CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE25185
(
Caenorhabditis remanei
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
CRE25185
T166948_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE25185
CUT
590
671
NGHPLNTTEIASHCKRLMIAYNIGQRLFAKHVMNQVVKSQGSLSELLSKPRHWNKLTDKGREAFRRIYGWISDDEAINLLCS
CRE25185
CUT
826
903
KYTVLDTELLVKQIKEFLTVNSMSQRQFGEFILGLSQGSVSDLLARPKTWIQLTQKGREPFIRMQLFMDEVAGVEEKD
CRE25185
CUT
974
1053
GEEILDSIEIVYRVKGVLEEHGISPRVFGDEYLHCSPSMCADLMIRTKPFELAKSTEKVMYHRMRNFLNDPSAIPDLVKK
CRE25185
Homeodomain
1090
1146
PIQRTVITDYQKDVLRFVFVNELHPSNEMCEQISTKLDMSLRTVQNWFHNHRTRSKA
Links
Other
CUT,Homeodomain
family TFs
Other
Caenorhabditis remanei
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ceh-44
Caenorhabditis elegans
WBGene00000464
N
0.876
CBG09849
Caenorhabditis briggsae
CBG09849
N
0.866
CBN06506
Caenorhabditis brenneri
CBN06506
N
0.851
CJA18592
Caenorhabditis japonica
CJA18592
N
0.789