ENSAPLG00000004382 (Anas platyrhynchos)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSAPLG00000004382 T166975_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CUX2
M02940_2.00
Homo sapiens
ATCRATAHNNDWATCGAT

ATCGATWHNNDTATYGAT
SELEX
Jolma et al.(2013)
CUX2_1
0.957 0.957
CUX2
M02941_2.00
Homo sapiens
DDATYGATYA

TRATCRATHH
SELEX
Jolma et al.(2013)
CUX2_2
0.957 0.957
CUX2
M04665_2.00
Homo sapiens
NTRATCGATYRN

NYRATCGATYAN
SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX
0.957 0.957
CUX2
M04666_2.00
Homo sapiens
BYRATCGATYRB

VYRATCGATYRV
SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX
0.957 0.957
Cux2
M09025_2.00
Mus musculus
NBBATTGATYD

HRATCAATVVN
Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C
0.954 0.954
CUX1
M02946_2.00
Homo sapiens
ATCRATHNNNDATCRAT

ATYGATHNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_1
0.869 0.869
CUX1
M02947_2.00
Homo sapiens
ATCRATHNNNNDATCRAT

ATYGATHNNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_2
0.869 0.869
CUX1
M02948_2.00
Homo sapiens
TDATCRATNN

NNATYGATHA
SELEX
Jolma et al.(2013)
CUX1_3
0.869 0.869
CUX1
M04679_2.00
Homo sapiens
NDATCRATNN

NNATYGATHN
SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX
0.869 0.869
CUX1
M09023_2.00
Homo sapiens
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C
0.869 0.869
Cux1
M09024_2.00
Mus musculus
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C
0.869 0.869
CUX1
M10422_2.00
Homo sapiens
CCAATAATCRAT

ATYGATTATTGG
Transfac
Matys et al.(2006)
V$CDP_01
0.869 0.869
CUX1
M10423_2.00
Homo sapiens
DWDATCGATYADHDH

DHDHTRATCGATHWH
Transfac
Matys et al.(2006)
V$CDP_02
0.869 0.869
CUX1
M10424_2.00
Homo sapiens
SCVATCRATN

NATYGATBGS
Transfac
Matys et al.(2006)
V$CDPCR1_01
0.869 0.869
CUX1
M10425_2.00
Homo sapiens
CVATABNTATYKGTG

CACMRATANVTATBG
Transfac
Matys et al.(2006)
V$CDPCR3_01
0.869 0.869
CUX1
M10426_2.00
Homo sapiens
SVSATCRATB

VATYGATSBS
Transfac
Matys et al.(2006)
V$CDPCR3HD_01
0.869 0.869
CUX1
M10427_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDP_Q6_01
0.869 0.869
CUX1
M10416_2.00
Canis familiaris
DHDATYGATYADYDW

WHRHTRATCRATHDH
Transfac
Matys et al.(2006)
V$CLOX_01
0.869 0.869
CUX1
M04680_2.00
Homo sapiens
NBATTGATHR

YDATCAATVN
SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX
0.869 0.869
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAPLP00000003909 CUT 538 616
ENSAPLP00000003909 CUT 892 967
ENSAPLP00000003909 CUT 1057 1134
ENSAPLP00000003909 Homeodomain 1156 1207

Links

Other CUT,Homeodomain family TFs
Other Anas platyrhynchos TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003487 Calypte anna Aan_R003487 I 0.865
Aan_R010335 Calypte anna Aan_R010335 I 0.975
Afo_R009437 Aptenodytes forsteri Afo_R009437 I 0.865
Alligator_sinensis_CCG004936.1 Alligator sinensis Alligator_sinensis_CCG004936.1 I 0.865
Alligator_sinensis_CCG016555.1 Alligator sinensis Alligator_sinensis_CCG016555.1 I 0.958
Cmyd_10006308 Chelonia mydas Cmyd_10006308 I 0.862
Cmyd_10015658 Chelonia mydas Cmyd_10015658 I 0.958
CUX1 Monodelphis domestica ENSMODG00000013581 I 0.853
CUX1 Felis catus ENSFCAG00000008074 I 0.869
CUX1 Pteropus vampyrus ENSPVAG00000017756 I 0.858
CUX1 Homo sapiens ENSG00000257923 D 0.851
CUX1 Ochotona princeps ENSOPRG00000000165 I 0.862
CUX1 Myotis lucifugus ENSMLUG00000007264 I 0.851
CUX1 Loxodonta africana ENSLAFG00000002555 I 0.869
Cux1 Mus musculus ENSMUSG00000029705 D 0.851
CUX1 Microcebus murinus ENSMICG00000010274 I 0.844
CUX1 Meleagris gallopavo ENSMGAG00000003398 I 0.864
CUX1 Macaca mulatta ENSMMUG00000021461 I 0.851
Cux1 Rattus norvegicus ENSRNOG00000001424 I 0.851
CUX1 Tursiops truncatus ENSTTRG00000014625 I 0.865
CUX1 Callithrix jacchus ENSCJAG00000016076 I 0.851
CUX1 Bos taurus ENSBTAG00000010659 I 0.851
CUX1 Canis familiaris ENSCAFG00000013749 D 0.851
CUX1 Anolis carolinensis ENSACAG00000015088 I 0.857
CUX1 Takifugu rubripes ENSTRUG00000008546 I 0.735
CUX1 Pan troglodytes ENSPTRG00000019531 I 0.851
CUX1 Taeniopygia guttata ENSTGUG00000004386 I 0.865
CUX1 Erinaceus europaeus ENSEEUG00000005128 I 0.851
cux1a Danio rerio ENSDARG00000078459 I 0.833
CUX2 Monodelphis domestica ENSMODG00000012254 I 0.955
Cux2 Rattus norvegicus ENSRNOG00000001259 I 0.924
cux2 Xenopus tropicalis XB-GENE-487236 I 0.943
Cux2 Mus musculus ENSMUSG00000042589 D 0.934
CUX2 Sus scrofa ENSSSCG00000009831 I 0.941
CUX2 Ornithorhynchus anatinus ENSOANG00000004793 I 0.965
CUX2 Otolemur garnettii ENSOGAG00000029919 I 0.941
CUX2 Tursiops truncatus ENSTTRG00000000945 I 0.938
CUX2 Ochotona princeps ENSOPRG00000006461 I 0.934
CUX2 Pan troglodytes ENSPTRG00000005455 I 0.823
CUX2 Taeniopygia guttata ENSTGUG00000006470 I 0.946
CUX2 Pteropus vampyrus ENSPVAG00000013176 I 0.937
CUX2 Oryctolagus cuniculus ENSOCUG00000021923 I 0.930
CUX2 Myotis lucifugus ENSMLUG00000003239 I 0.944
CUX2 Bos taurus ENSBTAG00000008571 I 0.941
CUX2 Canis familiaris ENSCAFG00000008575 I 0.944
CUX2 Gallus gallus ENSGALG00000004598 I 0.965
CUX2 Anolis carolinensis ENSACAG00000002281 I 0.937
CUX2 Loxodonta africana ENSLAFG00000001145 I 0.957
CUX2 Callithrix jacchus ENSCJAG00000011694 I 0.941
CUX2 Homo sapiens ENSG00000111249 D 0.941
CUX2 Felis catus ENSFCAG00000003176 I 0.944
CUX2 Cavia porcellus ENSCPOG00000020483 I 0.938
CUX2 Dasypus novemcinctus ENSDNOG00000039959 I 0.943
CUX2 Meleagris gallopavo ENSMGAG00000005225 I 0.965
cux2b Takifugu rubripes ENSTRUG00000015853 I 0.892
cux2b Tetraodon nigroviridis ENSTNIG00000011453 I 0.904
cux2b Oryzias latipes ENSORLG00000015973 I 0.892
cux2b Danio rerio ENSDARG00000086345 I 0.902
cux2b Gasterosteus aculeatus ENSGACG00000013522 I 0.885
ENSAMEG00000013799 Ailuropoda melanoleuca ENSAMEG00000013799 I 0.938
ENSAMEG00000015392 Ailuropoda melanoleuca ENSAMEG00000015392 I 0.869
ENSAMXG00000006105 Astyanax mexicanus ENSAMXG00000006105 I 0.888
ENSAMXG00000008817 Astyanax mexicanus ENSAMXG00000008817 I 0.823
ENSAPLG00000002588 Anas platyrhynchos ENSAPLG00000002588 I 0.865
ENSCSAG00000018062 Chlorocebus sabaeus ENSCSAG00000018062 I 0.851
ENSFALG00000009019 Ficedula albicollis ENSFALG00000009019 I 0.951
ENSFALG00000009409 Ficedula albicollis ENSFALG00000009409 I 0.865
ENSGALG00000001807 Gallus gallus ENSGALG00000001807 I 0.865
ENSGMOG00000008990 Gadus morhua ENSGMOG00000008990 I 0.748
ENSGMOG00000017485 Gadus morhua ENSGMOG00000017485 I 0.911
ENSLACG00000014413 Latimeria chalumnae ENSLACG00000014413 I 0.924
ENSLACG00000017710 Latimeria chalumnae ENSLACG00000017710 I 0.862
ENSLOCG00000001531 Lepisosteus oculatus ENSLOCG00000001531 I 0.862
ENSLOCG00000007417 Lepisosteus oculatus ENSLOCG00000007417 I 0.919
ENSMEUG00000004239 Macropus eugenii ENSMEUG00000004239 I 0.746
ENSMEUG00000013552 Macropus eugenii ENSMEUG00000013552 I 0.731
ENSMPUG00000002207 Mustela putorius furo ENSMPUG00000002207 I 0.934
ENSNLEG00000000470 Nomascus leucogenys ENSNLEG00000000470 I 0.941
ENSNLEG00000008310 Nomascus leucogenys ENSNLEG00000008310 I 0.851
ENSOARG00000014629 Ovis aries ENSOARG00000014629 I 0.869
ENSOARG00000017879 Ovis aries ENSOARG00000017879 I 0.937
ENSOGAG00000009038 Otolemur garnettii ENSOGAG00000009038 I 0.863
ENSONIG00000003797 Oreochromis niloticus ENSONIG00000003797 I 0.747
ENSONIG00000015972 Oreochromis niloticus ENSONIG00000015972 I 0.890
ENSP00000261726 Macaca fascicularis ENSP00000261726 I 0.941
ENSP00000261726-D1 Bos grunniens ENSP00000261726-D1 I 0.941
ENSP00000353401 Macaca fascicularis ENSP00000353401 I 0.851
ENSP00000353401-D1 Bos grunniens ENSP00000353401-D1 I 0.851
ENSPANG00000016879 Papio anubis ENSPANG00000016879 I 0.857
ENSPFOG00000005210 Poecilia formosa ENSPFOG00000005210 I 0.896
ENSPSIG00000008210 Pelodiscus sinensis ENSPSIG00000008210 I 0.862
ENSSHAG00000007801 Sarcophilus harrisii ENSSHAG00000007801 I 0.853
ENSSHAG00000009458 Sarcophilus harrisii ENSSHAG00000009458 I 0.958
ENSSTOG00000002242 Ictidomys tridecemlineatus ENSSTOG00000002242 I 0.930
ENSSTOG00000010390 Ictidomys tridecemlineatus ENSSTOG00000010390 I 0.847
ENSTNIG00000007722 Tetraodon nigroviridis ENSTNIG00000007722 I 0.747
ENSXMAG00000004131 Xiphophorus maculatus ENSXMAG00000004131 I 0.922
ENSXMAG00000018520 Xiphophorus maculatus ENSXMAG00000018520 I 0.733
Gfo_R003142 Geospiza fortis Gfo_R003142 I 0.972
Gfo_R011360 Geospiza fortis Gfo_R011360 I 0.865
Myotis_brandtii_CUX1_10015212 Myotis brandtii Myotis_brandtii_CUX1_10015212 I 0.865
Myotis_brandtii_CUX2_10011523 Myotis brandtii Myotis_brandtii_CUX2_10011523 I 0.944
Ogr05066 Ophisaurus gracilis Ogr05066 I 0.853
Ogr05872 Ophisaurus gracilis Ogr05872 I 0.950
Pvit_01819 Pogona vitticeps Pvit_01819 I 0.857
Pvit_05599 Pogona vitticeps Pvit_05599 I 0.948
Tal_R013483 Tyto alba Tal_R013483 I 0.859
XP_002942311 Xenopus tropicalis XP_002942311 I 0.841