satb2 (Danio rerio)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		ENSDARG00000061885 T167015_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within epiboly involved in gastrulation with mouth forming second. Predicted to be located in nucleus. Is expressed in fin; head; nervous system; pharyngeal endoderm; and pronephric duct. Human ortholog(s) of this gene implicated in SATB2-associated syndrome. Orthologous to human SATB2 (SATB homeobox 2). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SATB1
M10420_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SATB1_Q3 		0.824 0.824
SATB1
M10421_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SATB1_Q5_01 		0.824 0.824
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000083309 CUT 407 486
ENSDARP00000083309 CUT 529 606
ENSDARP00000083309 Homeodomain 677 734
ENSDARP00000141418 CUT 525 604
ENSDARP00000141418 CUT 676 753
ENSDARP00000141418 Homeodomain 824 881

Links

Other CUT,Homeodomain family TFs
Other Danio rerio TFs

Invalid Input OrderBy

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action