CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CUX2
(
Gorilla gorilla
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSGGOG00000012173
T167082_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CUX2
M02940_2.00
Homo sapiens
ATCRATAHNNDWATCGAT
ATCGATWHNNDTATYGAT
SELEX
Jolma et al.(2013)
CUX2_1
0.728
0.728
CUX2
M02941_2.00
Homo sapiens
DDATYGATYA
TRATCRATHH
SELEX
Jolma et al.(2013)
CUX2_2
0.728
0.728
CUX2
M04665_2.00
Homo sapiens
NTRATCGATYRN
NYRATCGATYAN
SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX
0.728
0.728
CUX2
M04666_2.00
Homo sapiens
BYRATCGATYRB
VYRATCGATYRV
SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX
0.728
0.728
Cux2
M09025_2.00
Mus musculus
NBBATTGATYD
HRATCAATVVN
Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C
0.712
0.712
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000011896
CUT
475
550
MYREVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLSDQLGQAV
ENSGGOP00000011896
CUT
626
703
MSPELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVEKLR
ENSGGOP00000011896
Homeodomain
752
808
KKPRVVLAPEEKEALRKAYQLEPYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMRR
ENSGGOP00000028224
CUT
815
890
MYREVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLSDQLGQAV
ENSGGOP00000028224
CUT
966
1043
MSPELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVEKLR
ENSGGOP00000028224
Homeodomain
1092
1148
KKPRVVLAPEEKEALRKAYQLEPYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMRR
Links
Other
CUT,Homeodomain
family TFs
Other
Gorilla gorilla
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy