CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSGGOG00000016960
(
Gorilla gorilla
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSGGOG00000016960
T167084_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CUX1
M02946_2.00
Homo sapiens
ATCRATHNNNDATCRAT
ATYGATHNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_1
0.733
0.733
CUX1
M02947_2.00
Homo sapiens
ATCRATHNNNNDATCRAT
ATYGATHNNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_2
0.733
0.733
CUX1
M02948_2.00
Homo sapiens
TDATCRATNN
NNATYGATHA
SELEX
Jolma et al.(2013)
CUX1_3
0.733
0.733
CUX1
M04679_2.00
Homo sapiens
NDATCRATNN
NNATYGATHN
SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX
0.733
0.733
CUX1
M09023_2.00
Homo sapiens
RBRVNDATYGRTBN
NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C
0.733
0.733
CUX1
M10422_2.00
Homo sapiens
CCAATAATCRAT
ATYGATTATTGG
Transfac
Matys et al.(2006)
V$CDP_01
0.733
0.733
CUX1
M10423_2.00
Homo sapiens
DWDATCGATYADHDH
DHDHTRATCGATHWH
Transfac
Matys et al.(2006)
V$CDP_02
0.733
0.733
CUX1
M10424_2.00
Homo sapiens
SCVATCRATN
NATYGATBGS
Transfac
Matys et al.(2006)
V$CDPCR1_01
0.733
0.733
CUX1
M10425_2.00
Homo sapiens
CVATABNTATYKGTG
CACMRATANVTATBG
Transfac
Matys et al.(2006)
V$CDPCR3_01
0.733
0.733
CUX1
M10426_2.00
Homo sapiens
SVSATCRATB
VATYGATSBS
Transfac
Matys et al.(2006)
V$CDPCR3HD_01
0.733
0.733
CUX1
M10427_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDP_Q6_01
0.733
0.733
CUX1
M04680_2.00
Homo sapiens
NBATTGATHR
YDATCAATVN
SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX
0.733
0.733
Cux1
M09024_2.00
Mus musculus
RBRVNDATYGRTBN
NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C
0.729
0.729
CUX1
M10416_2.00
Canis familiaris
DHDATYGATYADYDW
WHRHTRATCRATHDH
Transfac
Matys et al.(2006)
V$CLOX_01
0.729
0.729
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000016558
CUT
472
548
MYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVL
ENSGGOP00000016558
CUT
655
733
MSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMD
ENSGGOP00000016558
Homeodomain
778
834
KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEDLATQLNLKTSTVINWFHNYRSRIRR
ENSGGOP00000022013
CUT
472
548
MYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVL
ENSGGOP00000022013
CUT
655
733
MSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMD
ENSGGOP00000022013
Homeodomain
778
834
KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEDLATQLNLKTSTVINWFHNYRSRIRR
Links
Other
CUT,Homeodomain
family TFs
Other
Gorilla gorilla
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPANG00000011477
Papio anubis
ENSPANG00000011477
I
0.895
CUX2
Gorilla gorilla
ENSGGOG00000012173
I
0.895
ENSMEUG00000004239
Macropus eugenii
ENSMEUG00000004239
I
0.863
CUX1
Takifugu rubripes
ENSTRUG00000008546
I
0.801
ENSPFOG00000024261
Poecilia formosa
ENSPFOG00000024261
N
0.788
ENSOGAG00000009038
Otolemur garnettii
ENSOGAG00000009038
I
0.759
CUX2
Macaca mulatta
ENSMMUG00000001909
N
0.758
ENSPPYG00000004959
Pongo abelii
ENSPPYG00000004959
N
0.758
CUX2
Procavia capensis
ENSPCAG00000003973
N
0.745
CUX1
Macaca mulatta
ENSMMUG00000021461
I
0.733
ENSNLEG00000008310
Nomascus leucogenys
ENSNLEG00000008310
I
0.733
CUX1
Pan troglodytes
ENSPTRG00000019531
I
0.733
ENSP00000353401
Macaca fascicularis
ENSP00000353401
I
0.733
ENSPANG00000016879
Papio anubis
ENSPANG00000016879
I
0.733
CUX1
Homo sapiens
ENSG00000257923
D
0.733
ENSCSAG00000018062
Chlorocebus sabaeus
ENSCSAG00000018062
I
0.733
CUX1
Callithrix jacchus
ENSCJAG00000016076
I
0.733
Cux1
Mus musculus
ENSMUSG00000029705
D
0.729
ENSP00000353401-D1
Bos grunniens
ENSP00000353401-D1
I
0.729
CUX1
Myotis lucifugus
ENSMLUG00000007264
I
0.729
CUX1
Canis familiaris
ENSCAFG00000013749
D
0.729
Cux1
Rattus norvegicus
ENSRNOG00000001424
I
0.729
CUX1
Bos taurus
ENSBTAG00000010659
I
0.729
Pvit_01819
Pogona vitticeps
Pvit_01819
I
0.727
CUX1
Erinaceus europaeus
ENSEEUG00000005128
I
0.726
CUX1
Taeniopygia guttata
ENSTGUG00000004386
I
0.724
ENSFALG00000009409
Ficedula albicollis
ENSFALG00000009409
I
0.724
ENSSHAG00000007801
Sarcophilus harrisii
ENSSHAG00000007801
I
0.724
ENSAMEG00000015392
Ailuropoda melanoleuca
ENSAMEG00000015392
I
0.724
Aan_R003487
Calypte anna
Aan_R003487
I
0.724
Alligator_sinensis_CCG004936.1
Alligator sinensis
Alligator_sinensis_CCG004936.1
I
0.724
Afo_R009437
Aptenodytes forsteri
Afo_R009437
I
0.724
Ogr05066
Ophisaurus gracilis
Ogr05066
I
0.724
CUX1
Felis catus
ENSFCAG00000008074
I
0.724
CUX1
Monodelphis domestica
ENSMODG00000013581
I
0.724
ENSOARG00000014629
Ovis aries
ENSOARG00000014629
I
0.724
CUX1
Anolis carolinensis
ENSACAG00000015088
I
0.724
ENSGALG00000001807
Gallus gallus
ENSGALG00000001807
I
0.724
CUX1
Loxodonta africana
ENSLAFG00000002555
I
0.724
ENSAPLG00000002588
Anas platyrhynchos
ENSAPLG00000002588
I
0.724
Gfo_R011360
Geospiza fortis
Gfo_R011360
I
0.724
CUX1
Tursiops truncatus
ENSTTRG00000014625
I
0.723
CUX1
Ochotona princeps
ENSOPRG00000000165
I
0.722
ENSPSIG00000008210
Pelodiscus sinensis
ENSPSIG00000008210
I
0.720
Cmyd_10006308
Chelonia mydas
Cmyd_10006308
I
0.720
CUX1
Meleagris gallopavo
ENSMGAG00000003398
I
0.718
XP_002942311
Xenopus tropicalis
XP_002942311
I
0.716
ENSLACG00000017710
Latimeria chalumnae
ENSLACG00000017710
I
0.715
ENSSTOG00000010390
Ictidomys tridecemlineatus
ENSSTOG00000010390
I
0.715
Tal_R013483
Tyto alba
Tal_R013483
I
0.711
Myotis_brandtii_CUX1_10015212
Myotis brandtii
Myotis_brandtii_CUX1_10015212
I
0.711
ENSLOCG00000001531
Lepisosteus oculatus
ENSLOCG00000001531
I
0.701