CUX2 (Oryctolagus cuniculus)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSOCUG00000021923 T167180_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CUX2
M02940_2.00
Homo sapiens
ATCRATAHNNDWATCGAT

ATCGATWHNNDTATYGAT
SELEX
Jolma et al.(2013)
CUX2_1
0.990 0.990
CUX2
M02941_2.00
Homo sapiens
DDATYGATYA

TRATCRATHH
SELEX
Jolma et al.(2013)
CUX2_2
0.990 0.990
CUX2
M04665_2.00
Homo sapiens
NTRATCGATYRN

NYRATCGATYAN
SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX
0.990 0.990
CUX2
M04666_2.00
Homo sapiens
BYRATCGATYRB

VYRATCGATYRV
SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX
0.990 0.990
Cux2
M09025_2.00
Mus musculus
NBBATTGATYD

HRATCAATVVN
Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C
0.983 0.983
CUX1
M02946_2.00
Homo sapiens
ATCRATHNNNDATCRAT

ATYGATHNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_1
0.888 0.888
CUX1
M02947_2.00
Homo sapiens
ATCRATHNNNNDATCRAT

ATYGATHNNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_2
0.888 0.888
CUX1
M02948_2.00
Homo sapiens
TDATCRATNN

NNATYGATHA
SELEX
Jolma et al.(2013)
CUX1_3
0.888 0.888
CUX1
M04679_2.00
Homo sapiens
NDATCRATNN

NNATYGATHN
SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX
0.888 0.888
CUX1
M09023_2.00
Homo sapiens
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C
0.888 0.888
Cux1
M09024_2.00
Mus musculus
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C
0.888 0.888
CUX1
M10422_2.00
Homo sapiens
CCAATAATCRAT

ATYGATTATTGG
Transfac
Matys et al.(2006)
V$CDP_01
0.888 0.888
CUX1
M10423_2.00
Homo sapiens
DWDATCGATYADHDH

DHDHTRATCGATHWH
Transfac
Matys et al.(2006)
V$CDP_02
0.888 0.888
CUX1
M10424_2.00
Homo sapiens
SCVATCRATN

NATYGATBGS
Transfac
Matys et al.(2006)
V$CDPCR1_01
0.888 0.888
CUX1
M10425_2.00
Homo sapiens
CVATABNTATYKGTG

CACMRATANVTATBG
Transfac
Matys et al.(2006)
V$CDPCR3_01
0.888 0.888
CUX1
M10426_2.00
Homo sapiens
SVSATCRATB

VATYGATSBS
Transfac
Matys et al.(2006)
V$CDPCR3HD_01
0.888 0.888
CUX1
M10427_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDP_Q6_01
0.888 0.888
CUX1
M10416_2.00
Canis familiaris
DHDATYGATYADYDW

WHRHTRATCRATHDH
Transfac
Matys et al.(2006)
V$CLOX_01
0.888 0.888
CUX1
M04680_2.00
Homo sapiens
NBATTGATHR

YDATCAATVN
SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX
0.888 0.888
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000022483 CUT 440 518
ENSOCUP00000022483 CUT 767 842
ENSOCUP00000022483 CUT 918 995
ENSOCUP00000022483 Homeodomain 1044 1100

Links

Other CUT,Homeodomain family TFs
Other Oryctolagus cuniculus TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000013799 Ailuropoda melanoleuca ENSAMEG00000013799 I 0.979
ENSAMEG00000015392 Ailuropoda melanoleuca ENSAMEG00000015392 I 0.875
Alligator_sinensis_CCG016555.1 Alligator sinensis Alligator_sinensis_CCG016555.1 I 0.965
Alligator_sinensis_CCG004936.1 Alligator sinensis Alligator_sinensis_CCG004936.1 I 0.885
ENSAPLG00000002588 Anas platyrhynchos ENSAPLG00000002588 I 0.885
ENSAPLG00000004382 Anas platyrhynchos ENSAPLG00000004382 I 0.930
CUX2 Anolis carolinensis ENSACAG00000002281 I 0.948
CUX1 Anolis carolinensis ENSACAG00000015088 I 0.881
Afo_R009437 Aptenodytes forsteri Afo_R009437 I 0.885
ENSAMXG00000008817 Astyanax mexicanus ENSAMXG00000008817 I 0.850
ENSAMXG00000006105 Astyanax mexicanus ENSAMXG00000006105 I 0.923
ENSP00000261726-D1 Bos grunniens ENSP00000261726-D1 I 0.990
ENSP00000353401-D1 Bos grunniens ENSP00000353401-D1 I 0.885
CUX2 Bos taurus ENSBTAG00000008571 I 0.990
CUX1 Bos taurus ENSBTAG00000010659 I 0.885
CUX1 Callithrix jacchus ENSCJAG00000016076 I 0.888
CUX2 Callithrix jacchus ENSCJAG00000011694 I 0.990
Aan_R010335 Calypte anna Aan_R010335 I 0.955
Aan_R003487 Calypte anna Aan_R003487 I 0.885
CUX1 Canis familiaris ENSCAFG00000013749 D 0.885
CUX2 Canis familiaris ENSCAFG00000008575 I 0.983
CUX2 Cavia porcellus ENSCPOG00000020483 I 0.986
Cmyd_10015658 Chelonia mydas Cmyd_10015658 I 0.965
Cmyd_10006308 Chelonia mydas Cmyd_10006308 I 0.882
ENSCSAG00000018062 Chlorocebus sabaeus ENSCSAG00000018062 I 0.888
cux2b Danio rerio ENSDARG00000086345 I 0.927
cux1a Danio rerio ENSDARG00000078459 I 0.875
CUX2 Dasypus novemcinctus ENSDNOG00000039959 I 0.986
CUX1 Erinaceus europaeus ENSEEUG00000005128 I 0.892
CUX2 Felis catus ENSFCAG00000003176 I 0.983
CUX1 Felis catus ENSFCAG00000008074 I 0.875
ENSFALG00000009019 Ficedula albicollis ENSFALG00000009019 I 0.965
ENSFALG00000009409 Ficedula albicollis ENSFALG00000009409 I 0.885
ENSGMOG00000017485 Gadus morhua ENSGMOG00000017485 I 0.920
ENSGMOG00000008990 Gadus morhua ENSGMOG00000008990 I 0.718
ENSGALG00000001807 Gallus gallus ENSGALG00000001807 I 0.885
CUX2 Gallus gallus ENSGALG00000004598 I 0.965
ENSGACG00000009915 Gasterosteus aculeatus ENSGACG00000009915 I 0.700
cux2b Gasterosteus aculeatus ENSGACG00000013522 I 0.906
Gfo_R003142 Geospiza fortis Gfo_R003142 I 0.968
Gfo_R011360 Geospiza fortis Gfo_R011360 I 0.885
CUX2 Gorilla gorilla ENSGGOG00000012173 I 0.721
CUX1 Homo sapiens ENSG00000257923 D 0.888
CUX2 Homo sapiens ENSG00000111249 D 0.990
ENSSTOG00000002242 Ictidomys tridecemlineatus ENSSTOG00000002242 I 0.993
ENSSTOG00000010390 Ictidomys tridecemlineatus ENSSTOG00000010390 I 0.878
ENSLACG00000017710 Latimeria chalumnae ENSLACG00000017710 I 0.885
ENSLACG00000014413 Latimeria chalumnae ENSLACG00000014413 I 0.934
ENSLOCG00000001531 Lepisosteus oculatus ENSLOCG00000001531 I 0.885
ENSLOCG00000007417 Lepisosteus oculatus ENSLOCG00000007417 I 0.934
CUX1 Loxodonta africana ENSLAFG00000002555 I 0.875
CUX2 Loxodonta africana ENSLAFG00000001145 I 0.986
ENSP00000353401 Macaca fascicularis ENSP00000353401 I 0.888
ENSP00000261726 Macaca fascicularis ENSP00000261726 I 0.990
CUX1 Macaca mulatta ENSMMUG00000021461 I 0.888
ENSMEUG00000013552 Macropus eugenii ENSMEUG00000013552 I 0.714
CUX2 Meleagris gallopavo ENSMGAG00000005225 I 0.965
CUX1 Meleagris gallopavo ENSMGAG00000003398 I 0.864
CUX1 Microcebus murinus ENSMICG00000010274 I 0.885
CUX1 Monodelphis domestica ENSMODG00000013581 I 0.885
CUX2 Monodelphis domestica ENSMODG00000012254 I 0.972
ENSMPUG00000002207 Mustela putorius furo ENSMPUG00000002207 I 0.979
Cux2 Mus musculus ENSMUSG00000042589 D 0.983
Cux1 Mus musculus ENSMUSG00000029705 D 0.885
Myotis_brandtii_CUX2_10011523 Myotis brandtii Myotis_brandtii_CUX2_10011523 I 0.983
Myotis_brandtii_CUX1_10015212 Myotis brandtii Myotis_brandtii_CUX1_10015212 I 0.871
CUX1 Myotis lucifugus ENSMLUG00000007264 I 0.885
CUX2 Myotis lucifugus ENSMLUG00000003239 I 0.986
ENSNLEG00000000470 Nomascus leucogenys ENSNLEG00000000470 I 0.990
ENSNLEG00000008310 Nomascus leucogenys ENSNLEG00000008310 I 0.888
CUX2 Ochotona princeps ENSOPRG00000006461 I 0.990
CUX1 Ochotona princeps ENSOPRG00000000165 I 0.868
Ogr05066 Ophisaurus gracilis Ogr05066 I 0.882
Ogr05872 Ophisaurus gracilis Ogr05872 I 0.944
ENSONIG00000015972 Oreochromis niloticus ENSONIG00000015972 I 0.920
CUX2 Ornithorhynchus anatinus ENSOANG00000004793 I 0.958
cux2b Oryzias latipes ENSORLG00000015973 I 0.916
CUX2 Otolemur garnettii ENSOGAG00000029919 I 0.990
ENSOGAG00000009038 Otolemur garnettii ENSOGAG00000009038 I 0.864
ENSOARG00000017879 Ovis aries ENSOARG00000017879 I 0.986
ENSOARG00000014629 Ovis aries ENSOARG00000014629 I 0.875
CUX1 Pan troglodytes ENSPTRG00000019531 I 0.888
CUX2 Pan troglodytes ENSPTRG00000005455 I 0.847
ENSPANG00000016879 Papio anubis ENSPANG00000016879 I 0.888
ENSPANG00000011477 Papio anubis ENSPANG00000011477 I 0.721
ENSPSIG00000008210 Pelodiscus sinensis ENSPSIG00000008210 I 0.882
ENSPFOG00000005210 Poecilia formosa ENSPFOG00000005210 I 0.923
Pvit_01819 Pogona vitticeps Pvit_01819 I 0.885
Pvit_05599 Pogona vitticeps Pvit_05599 I 0.965
CUX1 Pteropus vampyrus ENSPVAG00000017756 I 0.721
CUX2 Pteropus vampyrus ENSPVAG00000013176 I 0.993
Cux1 Rattus norvegicus ENSRNOG00000001424 I 0.885
Cux2 Rattus norvegicus ENSRNOG00000001259 I 0.976
ENSSHAG00000009458 Sarcophilus harrisii ENSSHAG00000009458 I 0.969
ENSSHAG00000007801 Sarcophilus harrisii ENSSHAG00000007801 I 0.885
CUX2 Sus scrofa ENSSSCG00000009831 I 0.990
CUX1 Taeniopygia guttata ENSTGUG00000004386 I 0.885
CUX2 Taeniopygia guttata ENSTGUG00000006470 I 0.942
cux2b Takifugu rubripes ENSTRUG00000015853 I 0.913
ENSTNIG00000007722 Tetraodon nigroviridis ENSTNIG00000007722 I 0.766
cux2b Tetraodon nigroviridis ENSTNIG00000011453 I 0.909
CUX1 Tursiops truncatus ENSTTRG00000014625 I 0.871
CUX2 Tursiops truncatus ENSTTRG00000000945 I 0.990
Tal_R013483 Tyto alba Tal_R013483 I 0.871
cux2 Xenopus tropicalis XB-GENE-487236 I 0.941
XP_002942311 Xenopus tropicalis XP_002942311 I 0.888
ENSXMAG00000018520 Xiphophorus maculatus ENSXMAG00000018520 I 0.700
ENSXMAG00000004131 Xiphophorus maculatus ENSXMAG00000004131 I 0.927