CUX2 (Otolemur garnettii)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSOGAG00000029919 T167185_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CUX2
M02940_2.00
Homo sapiens
ATCRATAHNNDWATCGAT

ATCGATWHNNDTATYGAT
SELEX
Jolma et al.(2013)
CUX2_1
1.000 1.000
CUX2
M02941_2.00
Homo sapiens
DDATYGATYA

TRATCRATHH
SELEX
Jolma et al.(2013)
CUX2_2
1.000 1.000
CUX2
M04665_2.00
Homo sapiens
NTRATCGATYRN

NYRATCGATYAN
SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX
1.000 1.000
CUX2
M04666_2.00
Homo sapiens
BYRATCGATYRB

VYRATCGATYRV
SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX
1.000 1.000
Cux2
M09025_2.00
Mus musculus
NBBATTGATYD

HRATCAATVVN
Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C
0.986 0.986
CUX1
M02946_2.00
Homo sapiens
ATCRATHNNNDATCRAT

ATYGATHNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_1
0.888 0.888
CUX1
M02947_2.00
Homo sapiens
ATCRATHNNNNDATCRAT

ATYGATHNNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_2
0.888 0.888
CUX1
M02948_2.00
Homo sapiens
TDATCRATNN

NNATYGATHA
SELEX
Jolma et al.(2013)
CUX1_3
0.888 0.888
CUX1
M04679_2.00
Homo sapiens
NDATCRATNN

NNATYGATHN
SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX
0.888 0.888
CUX1
M09023_2.00
Homo sapiens
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C
0.888 0.888
Cux1
M09024_2.00
Mus musculus
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C
0.888 0.888
CUX1
M10422_2.00
Homo sapiens
CCAATAATCRAT

ATYGATTATTGG
Transfac
Matys et al.(2006)
V$CDP_01
0.888 0.888
CUX1
M10423_2.00
Homo sapiens
DWDATCGATYADHDH

DHDHTRATCGATHWH
Transfac
Matys et al.(2006)
V$CDP_02
0.888 0.888
CUX1
M10424_2.00
Homo sapiens
SCVATCRATN

NATYGATBGS
Transfac
Matys et al.(2006)
V$CDPCR1_01
0.888 0.888
CUX1
M10425_2.00
Homo sapiens
CVATABNTATYKGTG

CACMRATANVTATBG
Transfac
Matys et al.(2006)
V$CDPCR3_01
0.888 0.888
CUX1
M10426_2.00
Homo sapiens
SVSATCRATB

VATYGATSBS
Transfac
Matys et al.(2006)
V$CDPCR3HD_01
0.888 0.888
CUX1
M10427_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDP_Q6_01
0.888 0.888
CUX1
M10416_2.00
Canis familiaris
DHDATYGATYADYDW

WHRHTRATCRATHDH
Transfac
Matys et al.(2006)
V$CLOX_01
0.888 0.888
CUX1
M04680_2.00
Homo sapiens
NBATTGATHR

YDATCAATVN
SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX
0.888 0.888
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000018676 CUT 549 627
ENSOGAP00000018676 CUT 894 969
ENSOGAP00000018676 CUT 1045 1122
ENSOGAP00000018676 Homeodomain 1171 1227

Links

Other CUT,Homeodomain family TFs
Other Otolemur garnettii TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB006342 Anopheles albimanus AALB006342 I 0.000
AARA001120 Anopheles arabiensis AARA001120 I 0.000
AATE007772 Anopheles atroparvus AATE007772 I 0.000
ACHR009800 Anopheles christyi ACHR009800 I 0.000
ACUA027429 Anopheles culicifacies ACUA027429 I 0.000
ADAC004542 Anopheles darlingi ADAC004542 I 0.000
ADIR000964 Anopheles dirus ADIR000964 I 0.000
AFAF010901 Anopheles farauti AFAF010901 I 0.000
AFUN011579 Anopheles funestus AFUN011579 I 0.000
AGAP000057 Anopheles gambiae AGAP000057 I 0.000
ALUE_0001419501 Ascaris lumbricoides ALUE_0001419501 I 0.000
AMAM018366 Anopheles maculatus AMAM018366 I 0.000
AMEC016969 Anopheles melas AMEC016969 I 0.000
AMEM003247 Anopheles merus AMEM003247 I 0.000
AMIN002123 Anopheles minimus AMIN002123 I 0.000
ASIS021176 Anopheles sinensis ASIS021176 I 0.000
ASTEI06196 Anopheles stephensi ASTEI06196 I 0.000
ASU_03705 Ascaris suum ASU_03705 I 0.000
BGLB002026 Biomphalaria glabrata BGLB002026 N 0.000
Bm1956 Brugia malayi Bm1956 I 0.000
CLEC006620 Cimex lectularius CLEC006620 I 0.000
D915_05650 Fasciola hepatica D915_05650 N 0.000
D917_02818 Trichinella nativa D917_02818 I 0.000
DILT_0001709501 Diphyllobothrium latum DILT_0001709501 I 0.000
EEL_0001009001 Elaeophora elaphi EEL_0001009001 I 0.000
ENSAMXG00000009227 Astyanax mexicanus ENSAMXG00000009227 I 0.000
ENSGMOG00000000463 Gadus morhua ENSGMOG00000000463 I 0.000
ENSOANG00000029256 Ornithorhynchus anatinus ENSOANG00000029256 I 0.000
ENSONIG00000000205 Oreochromis niloticus ENSONIG00000000205 I 0.000
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.000
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.000
ENSPFOG00000019830 Poecilia formosa ENSPFOG00000019830 I 0.000
ENSPSIG00000012152 Pelodiscus sinensis ENSPSIG00000012152 I 0.000
GF20618 Drosophila ananassae FBgn0097624 I 0.000
GH23966 Drosophila grimshawi FBgn0131423 I 0.000
GI14046 Drosophila mojavensis FBgn0136800 I 0.000
GJ13730 Drosophila virilis FBgn0200951 I 0.000
GK13586 Drosophila willistoni FBgn0215594 I 0.000
GL18401 Drosophila persimilis FBgn0156002 I 0.000
GM13025 Drosophila sechellia FBgn0167956 I 0.000
HelroG124549 Helobdella robusta HelroG124549 I 0.000
HHAL006987-PA Halyomorpha halys HHAL006987-PA I 0.000
L596_g7168 Steinernema carpocapsae L596_g7168 I 0.000
L889_g28670 Steinernema feltiae L889_g28670 I 0.000
L892_g26455 Steinernema scapterisci L892_g26455 I 0.000
L898_g18055 Steinernema monticolum L898_g18055 I 0.000
LLOJ002076 Lutzomyia longipalpis LLOJ002076 I 0.000
LOAG_00159 Loa loa LOAG_00159 I 0.000
LotgiG135549 Lottia gigantea LotgiG135549 I 0.000
MESCA003563 Megaselia scalaris MESCA003563 I 0.000
nDi.2.2.2.g01404 Dirofilaria immitis nDi.2.2.2.g01404 I 0.000
nLs.2.1.2.g05197 Litomosoides sigmodontis nLs.2.1.2.g05197 I 0.000
Pax-2 Gallus gallus ENSGALG00000005689 I 0.000
pax-2 Caenorhabditis elegans WBGene00003938 D 0.000
PAX2 Homo sapiens ENSG00000075891 D 0.000
pax2 Xenopus tropicalis XB-GENE-486801 D 0.000
pax2.L Xenopus laevis XB-GENE-486805 I 0.000
pax2/5/8-b Ciona intestinalis ENSCING00000005977 I 0.000
pax2a Danio rerio ENSDARG00000028148 I 0.000
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.000
pax2b Danio rerio ENSDARG00000032578 D 0.000
PAX5 Homo sapiens ENSG00000196092 D 0.000
Pax5 Mus musculus ENSMUSG00000014030 D 0.000
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.000
pax8 Xenopus tropicalis XB-GENE-483693 I 0.000
Pax8 Rattus norvegicus ENSRNOG00000026203 D 0.000
pax8 Danio rerio ENSDARG00000015879 I 0.000
pax8 Oryzias latipes ENSORLG00000007225 I 0.000
Pax8 Dipodomys ordii ENSDORG00000002606 I 0.000
PAX8 Equus caballus ENSECAG00000009244 I 0.000
PTRK_0001603600 Parastrongyloides trichosuri PTRK_0001603600 I 0.000
RSKR_0000585500 Rhabditophanes kr3021 RSKR_0000585500 I 0.000
SMUV_0000412301 Syphacia muris SMUV_0000412301 I 0.000
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.000
SPER_0000498301 Spirometra erinaceieuropaei SPER_0000498301 I 0.000
SSLN_0001596201 Schistocephalus solidus SSLN_0001596201 I 0.000
tetur29g01000 Tetranychus urticae tetur29g01000 I 0.000
TRE_0001207401 Trichobilharzia regenti TRE_0001207401 I 0.000
TTAC_0001098501 Hydatigera taeniaeformis TTAC_0001098501 I 0.000