CUX1 (Procavia capensis)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSPCAG00000004482 T167214_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Cux1
M09024_2.00
Mus musculus
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C
0.784 0.784
CUX1
M10416_2.00
Canis familiaris
DHDATYGATYADYDW

WHRHTRATCRATHDH
Transfac
Matys et al.(2006)
V$CLOX_01
0.784 0.784
CUX1
M02946_2.00
Homo sapiens
ATCRATHNNNDATCRAT

ATYGATHNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_1
0.775 0.775
CUX1
M02947_2.00
Homo sapiens
ATCRATHNNNNDATCRAT

ATYGATHNNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_2
0.775 0.775
CUX1
M02948_2.00
Homo sapiens
TDATCRATNN

NNATYGATHA
SELEX
Jolma et al.(2013)
CUX1_3
0.775 0.775
CUX1
M04679_2.00
Homo sapiens
NDATCRATNN

NNATYGATHN
SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX
0.775 0.775
CUX1
M09023_2.00
Homo sapiens
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C
0.775 0.775
CUX1
M10422_2.00
Homo sapiens
CCAATAATCRAT

ATYGATTATTGG
Transfac
Matys et al.(2006)
V$CDP_01
0.775 0.775
CUX1
M10423_2.00
Homo sapiens
DWDATCGATYADHDH

DHDHTRATCGATHWH
Transfac
Matys et al.(2006)
V$CDP_02
0.775 0.775
CUX1
M10424_2.00
Homo sapiens
SCVATCRATN

NATYGATBGS
Transfac
Matys et al.(2006)
V$CDPCR1_01
0.775 0.775
CUX1
M10425_2.00
Homo sapiens
CVATABNTATYKGTG

CACMRATANVTATBG
Transfac
Matys et al.(2006)
V$CDPCR3_01
0.775 0.775
CUX1
M10426_2.00
Homo sapiens
SVSATCRATB

VATYGATSBS
Transfac
Matys et al.(2006)
V$CDPCR3HD_01
0.775 0.775
CUX1
M10427_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDP_Q6_01
0.775 0.775
CUX1
M04680_2.00
Homo sapiens
NBATTGATHR

YDATCAATVN
SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX
0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000004314 CUT 538 571
ENSPCAP00000004314 CUT 955 1006
ENSPCAP00000004314 CUT 1113 1191
ENSPCAP00000004314 Homeodomain 1236 1292

Links

Other CUT,Homeodomain family TFs
Other Procavia capensis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG004936.1 Alligator sinensis Alligator_sinensis_CCG004936.1 I 0.784
Afo_R009437 Aptenodytes forsteri Afo_R009437 I 0.784
Aan_R003487 Calypte anna Aan_R003487 I 0.784
CUX1 Taeniopygia guttata ENSTGUG00000004386 I 0.784
ENSGALG00000001807 Gallus gallus ENSGALG00000001807 I 0.784
ENSAPLG00000002588 Anas platyrhynchos ENSAPLG00000002588 I 0.784
ENSFALG00000009409 Ficedula albicollis ENSFALG00000009409 I 0.784
Gfo_R011360 Geospiza fortis Gfo_R011360 I 0.784
Cmyd_10006308 Chelonia mydas Cmyd_10006308 I 0.779
ENSPSIG00000008210 Pelodiscus sinensis ENSPSIG00000008210 I 0.779
ENSLACG00000017710 Latimeria chalumnae ENSLACG00000017710 I 0.765
ENSOARG00000014629 Ovis aries ENSOARG00000014629 I 0.761
CUX1 Felis catus ENSFCAG00000008074 I 0.761
CUX1 Loxodonta africana ENSLAFG00000002555 I 0.761
ENSAMEG00000015392 Ailuropoda melanoleuca ENSAMEG00000015392 I 0.761
Myotis_brandtii_CUX1_10015212 Myotis brandtii Myotis_brandtii_CUX1_10015212 I 0.756
CUX1 Ochotona princeps ENSOPRG00000000165 I 0.746
ENSGACG00000009915 Gasterosteus aculeatus ENSGACG00000009915 I 0.728