CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000003536
(
Pelodiscus sinensis
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSPSIG00000003536
T167235_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CUX2
M02940_2.00
Homo sapiens
ATCRATAHNNDWATCGAT
ATCGATWHNNDTATYGAT
SELEX
Jolma et al.(2013)
CUX2_1
0.711
0.711
CUX2
M02941_2.00
Homo sapiens
DDATYGATYA
TRATCRATHH
SELEX
Jolma et al.(2013)
CUX2_2
0.709
0.709
CUX2
M04665_2.00
Homo sapiens
NTRATCGATYRN
NYRATCGATYAN
SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX
0.709
0.709
CUX2
M04666_2.00
Homo sapiens
BYRATCGATYRB
VYRATCGATYRV
SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX
0.709
0.709
Cux2
M09025_2.00
Mus musculus
NBBATTGATYD
HRATCAATVVN
Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C
0.705
0.705
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000003726
CUT
496
572
GEEXTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVGGKEPFLKMKQFLSDEQNVLALRT
ENSPSIP00000003726
CUT
854
929
MYREVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNDQLGQGI
ENSPSIP00000003726
CUT
1030
1107
MSPELDTYSITKKVKEVLTDNNLGQRLRGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLR
ENSPSIP00000003726
Homeodomain
1157
1213
KKPRVVLAPEEKEALKKAYPGEPYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMRR
ENSPSIP00000003728
CUT
396
473
GEHTXTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVGGKEPFLKMKQFLSDEQNVLALRT
ENSPSIP00000003728
CUT
755
830
MYREVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNDQLGQGI
ENSPSIP00000003728
CUT
931
1008
MSPELDTYSITKKVKEVLTDNNLGQRLRGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLR
ENSPSIP00000003728
Homeodomain
1049
1105
KKPRVVLAPEEKEALKKAYPGEPYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMRR
Links
Other
CUT,Homeodomain
family TFs
Other
Pelodiscus sinensis
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy