Satb1 (Rattus norvegicus)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		ENSRNOG00000012942 T167255_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in chromatin remodeling and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including T cell activation; histone methylation; and negative regulation of transcription by RNA polymerase II. Predicted to be located in PML body; heterochromatin; and nuclear matrix. Orthologous to human SATB1 (SATB homeobox 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SATB1
M10420_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SATB1_Q3 		1.000 1.000
SATB1
M10421_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SATB1_Q5_01 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000017557 CUT 366 445
ENSRNOP00000017557 CUT 489 568
ENSRNOP00000017557 Homeodomain 646 703
ENSRNOP00000070853 CUT 366 445
ENSRNOP00000070853 CUT 489 568

Links

Other CUT,Homeodomain family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action