ENSSTOG00000002242 (Ictidomys tridecemlineatus)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSSTOG00000002242 T167269_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CUX2
M02940_2.00
Homo sapiens
ATCRATAHNNDWATCGAT

ATCGATWHNNDTATYGAT
SELEX
Jolma et al.(2013)
CUX2_1
0.990 0.990
CUX2
M02941_2.00
Homo sapiens
DDATYGATYA

TRATCRATHH
SELEX
Jolma et al.(2013)
CUX2_2
0.990 0.990
CUX2
M04665_2.00
Homo sapiens
NTRATCGATYRN

NYRATCGATYAN
SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX
0.990 0.990
CUX2
M04666_2.00
Homo sapiens
BYRATCGATYRB

VYRATCGATYRV
SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX
0.990 0.990
Cux2
M09025_2.00
Mus musculus
NBBATTGATYD

HRATCAATVVN
Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C
0.983 0.983
CUX1
M02946_2.00
Homo sapiens
ATCRATHNNNDATCRAT

ATYGATHNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_1
0.885 0.885
CUX1
M02947_2.00
Homo sapiens
ATCRATHNNNNDATCRAT

ATYGATHNNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_2
0.885 0.885
CUX1
M02948_2.00
Homo sapiens
TDATCRATNN

NNATYGATHA
SELEX
Jolma et al.(2013)
CUX1_3
0.885 0.885
CUX1
M04679_2.00
Homo sapiens
NDATCRATNN

NNATYGATHN
SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX
0.885 0.885
CUX1
M09023_2.00
Homo sapiens
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C
0.885 0.885
Cux1
M09024_2.00
Mus musculus
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C
0.885 0.885
CUX1
M10422_2.00
Homo sapiens
CCAATAATCRAT

ATYGATTATTGG
Transfac
Matys et al.(2006)
V$CDP_01
0.885 0.885
CUX1
M10423_2.00
Homo sapiens
DWDATCGATYADHDH

DHDHTRATCGATHWH
Transfac
Matys et al.(2006)
V$CDP_02
0.885 0.885
CUX1
M10424_2.00
Homo sapiens
SCVATCRATN

NATYGATBGS
Transfac
Matys et al.(2006)
V$CDPCR1_01
0.885 0.885
CUX1
M10425_2.00
Homo sapiens
CVATABNTATYKGTG

CACMRATANVTATBG
Transfac
Matys et al.(2006)
V$CDPCR3_01
0.885 0.885
CUX1
M10426_2.00
Homo sapiens
SVSATCRATB

VATYGATSBS
Transfac
Matys et al.(2006)
V$CDPCR3HD_01
0.885 0.885
CUX1
M10427_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDP_Q6_01
0.885 0.885
CUX1
M10416_2.00
Canis familiaris
DHDATYGATYADYDW

WHRHTRATCRATHDH
Transfac
Matys et al.(2006)
V$CLOX_01
0.885 0.885
CUX1
M04680_2.00
Homo sapiens
NBATTGATHR

YDATCAATVN
SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX
0.885 0.885
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000002017 CUT 309 387
ENSSTOP00000002017 CUT 651 726
ENSSTOP00000002017 CUT 802 879
ENSSTOP00000002017 Homeodomain 928 984

Links

Other CUT,Homeodomain family TFs
Other Ictidomys tridecemlineatus TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003487 Calypte anna Aan_R003487 I 0.882
Aan_R010335 Calypte anna Aan_R010335 I 0.955
Afo_R009437 Aptenodytes forsteri Afo_R009437 I 0.882
Alligator_sinensis_CCG004936.1 Alligator sinensis Alligator_sinensis_CCG004936.1 I 0.882
Alligator_sinensis_CCG016555.1 Alligator sinensis Alligator_sinensis_CCG016555.1 I 0.965
Cmyd_10006308 Chelonia mydas Cmyd_10006308 I 0.878
Cmyd_10015658 Chelonia mydas Cmyd_10015658 I 0.969
Cux1 Rattus norvegicus ENSRNOG00000001424 I 0.882
CUX1 Erinaceus europaeus ENSEEUG00000005128 I 0.888
CUX1 Monodelphis domestica ENSMODG00000013581 I 0.885
CUX1 Homo sapiens ENSG00000257923 D 0.882
CUX1 Loxodonta africana ENSLAFG00000002555 I 0.871
CUX1 Pteropus vampyrus ENSPVAG00000017756 I 0.718
CUX1 Felis catus ENSFCAG00000008074 I 0.871
Cux1 Mus musculus ENSMUSG00000029705 D 0.882
CUX1 Microcebus murinus ENSMICG00000010274 I 0.881
CUX1 Taeniopygia guttata ENSTGUG00000004386 I 0.882
CUX1 Pan troglodytes ENSPTRG00000019531 I 0.882
CUX1 Anolis carolinensis ENSACAG00000015088 I 0.878
CUX1 Meleagris gallopavo ENSMGAG00000003398 I 0.882
CUX1 Bos taurus ENSBTAG00000010659 I 0.882
CUX1 Callithrix jacchus ENSCJAG00000016076 I 0.885
CUX1 Canis familiaris ENSCAFG00000013749 D 0.882
CUX1 Tursiops truncatus ENSTTRG00000014625 I 0.868
CUX1 Myotis lucifugus ENSMLUG00000007264 I 0.882
CUX1 Takifugu rubripes ENSTRUG00000008546 I 0.758
CUX1 Macaca mulatta ENSMMUG00000021461 I 0.882
CUX1 Ochotona princeps ENSOPRG00000000165 I 0.864
cux1a Danio rerio ENSDARG00000078459 I 0.871
CUX2 Myotis lucifugus ENSMLUG00000003239 I 0.986
cux2 Xenopus tropicalis XB-GENE-487236 I 0.941
CUX2 Tursiops truncatus ENSTTRG00000000945 I 0.986
CUX2 Taeniopygia guttata ENSTGUG00000006470 I 0.942
CUX2 Monodelphis domestica ENSMODG00000012254 I 0.969
CUX2 Sus scrofa ENSSSCG00000009831 I 0.990
CUX2 Ochotona princeps ENSOPRG00000006461 I 0.997
CUX2 Pteropus vampyrus ENSPVAG00000013176 I 0.993
Cux2 Mus musculus ENSMUSG00000042589 D 0.983
Cux2 Rattus norvegicus ENSRNOG00000001259 I 0.969
CUX2 Pan troglodytes ENSPTRG00000005455 I 0.847
CUX2 Oryctolagus cuniculus ENSOCUG00000021923 I 0.993
CUX2 Otolemur garnettii ENSOGAG00000029919 I 0.990
CUX2 Ornithorhynchus anatinus ENSOANG00000004793 I 0.958
CUX2 Meleagris gallopavo ENSMGAG00000005225 I 0.965
CUX2 Gallus gallus ENSGALG00000004598 I 0.965
CUX2 Bos taurus ENSBTAG00000008571 I 0.990
CUX2 Canis familiaris ENSCAFG00000008575 I 0.979
CUX2 Callithrix jacchus ENSCJAG00000011694 I 0.990
CUX2 Anolis carolinensis ENSACAG00000002281 I 0.948
CUX2 Homo sapiens ENSG00000111249 D 0.990
CUX2 Felis catus ENSFCAG00000003176 I 0.979
CUX2 Cavia porcellus ENSCPOG00000020483 I 0.983
CUX2 Gorilla gorilla ENSGGOG00000012173 I 0.721
CUX2 Loxodonta africana ENSLAFG00000001145 I 0.986
CUX2 Dasypus novemcinctus ENSDNOG00000039959 I 0.979
cux2b Tetraodon nigroviridis ENSTNIG00000011453 I 0.913
cux2b Takifugu rubripes ENSTRUG00000015853 I 0.916
cux2b Gasterosteus aculeatus ENSGACG00000013522 I 0.910
cux2b Danio rerio ENSDARG00000086345 I 0.930
cux2b Oryzias latipes ENSORLG00000015973 I 0.917
ENSAMEG00000013799 Ailuropoda melanoleuca ENSAMEG00000013799 I 0.972
ENSAMEG00000015392 Ailuropoda melanoleuca ENSAMEG00000015392 I 0.871
ENSAMXG00000006105 Astyanax mexicanus ENSAMXG00000006105 I 0.920
ENSAMXG00000008817 Astyanax mexicanus ENSAMXG00000008817 I 0.847
ENSAPLG00000002588 Anas platyrhynchos ENSAPLG00000002588 I 0.882
ENSAPLG00000004382 Anas platyrhynchos ENSAPLG00000004382 I 0.930
ENSCSAG00000018062 Chlorocebus sabaeus ENSCSAG00000018062 I 0.882
ENSFALG00000009019 Ficedula albicollis ENSFALG00000009019 I 0.965
ENSFALG00000009409 Ficedula albicollis ENSFALG00000009409 I 0.882
ENSGALG00000001807 Gallus gallus ENSGALG00000001807 I 0.882
ENSGMOG00000008990 Gadus morhua ENSGMOG00000008990 I 0.714
ENSGMOG00000017485 Gadus morhua ENSGMOG00000017485 I 0.923
ENSLACG00000014413 Latimeria chalumnae ENSLACG00000014413 I 0.937
ENSLACG00000017710 Latimeria chalumnae ENSLACG00000017710 I 0.882
ENSLOCG00000001531 Lepisosteus oculatus ENSLOCG00000001531 I 0.882
ENSLOCG00000007417 Lepisosteus oculatus ENSLOCG00000007417 I 0.944
ENSMEUG00000004239 Macropus eugenii ENSMEUG00000004239 I 0.775
ENSMEUG00000013552 Macropus eugenii ENSMEUG00000013552 I 0.714
ENSMPUG00000002207 Mustela putorius furo ENSMPUG00000002207 I 0.976
ENSNLEG00000000470 Nomascus leucogenys ENSNLEG00000000470 I 0.990
ENSNLEG00000008310 Nomascus leucogenys ENSNLEG00000008310 I 0.882
ENSOARG00000014629 Ovis aries ENSOARG00000014629 I 0.871
ENSOARG00000017879 Ovis aries ENSOARG00000017879 I 0.986
ENSOGAG00000009038 Otolemur garnettii ENSOGAG00000009038 I 0.888
ENSONIG00000003797 Oreochromis niloticus ENSONIG00000003797 I 0.770
ENSONIG00000015972 Oreochromis niloticus ENSONIG00000015972 I 0.914
ENSP00000261726 Macaca fascicularis ENSP00000261726 I 0.990
ENSP00000261726-D1 Bos grunniens ENSP00000261726-D1 I 0.990
ENSP00000353401 Macaca fascicularis ENSP00000353401 I 0.882
ENSP00000353401-D1 Bos grunniens ENSP00000353401-D1 I 0.882
ENSPANG00000011477 Papio anubis ENSPANG00000011477 I 0.721
ENSPANG00000016879 Papio anubis ENSPANG00000016879 I 0.882
ENSPFOG00000005210 Poecilia formosa ENSPFOG00000005210 I 0.920
ENSPSIG00000008210 Pelodiscus sinensis ENSPSIG00000008210 I 0.878
ENSSHAG00000007801 Sarcophilus harrisii ENSSHAG00000007801 I 0.885
ENSSHAG00000009458 Sarcophilus harrisii ENSSHAG00000009458 I 0.965
ENSSTOG00000010390 Ictidomys tridecemlineatus ENSSTOG00000010390 I 0.872
ENSTNIG00000007722 Tetraodon nigroviridis ENSTNIG00000007722 I 0.770
ENSXMAG00000004131 Xiphophorus maculatus ENSXMAG00000004131 I 0.930
ENSXMAG00000018520 Xiphophorus maculatus ENSXMAG00000018520 I 0.759
Gfo_R003142 Geospiza fortis Gfo_R003142 I 0.968
Gfo_R011360 Geospiza fortis Gfo_R011360 I 0.882
Myotis_brandtii_CUX1_10015212 Myotis brandtii Myotis_brandtii_CUX1_10015212 I 0.868
Myotis_brandtii_CUX2_10011523 Myotis brandtii Myotis_brandtii_CUX2_10011523 I 0.983
Ogr05066 Ophisaurus gracilis Ogr05066 I 0.878
Ogr05872 Ophisaurus gracilis Ogr05872 I 0.944
Pvit_01819 Pogona vitticeps Pvit_01819 I 0.885
Pvit_05599 Pogona vitticeps Pvit_05599 I 0.962
Tal_R013483 Tyto alba Tal_R013483 I 0.877
XP_002942311 Xenopus tropicalis XP_002942311 I 0.879