KGM_19875 (Danaus plexippus)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
KGM_19875 T167359_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
onecut
M03716_2.00
Drosophila melanogaster
NNVRATCRATAHNN

NNDTATYGATYBNN
SELEX
Nitta et al.(2015)
onecut_1
0.970 0.970
onecut
M03717_2.00
Drosophila melanogaster
NNTATYGATTWNN

NNWAATCRATANN
SELEX
Nitta et al.(2015)
onecut_2
0.970 0.970
onecut
M06472_2.00
Drosophila melanogaster
HAATCAA

TTGATTD
B1H
Mathelier et al.(2014)
MA0235.1
0.970 0.970
ONECUT2
M02942_2.00
Homo sapiens
DDTATYGATTTTYN

NRAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT2_1
0.896 0.896
ONECUT2
M03714_2.00
Homo sapiens
NDDTATCGATYBNN

NNVRATCGATAHHN
SELEX
Nitta et al.(2015)
ONECUT2_1
0.896 0.896
ONECUT2
M04667_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT2_eDBD_HT-SELEX
0.896 0.896
ONECUT2
M04669_2.00
Homo sapiens
NNSGATCGATAH

DTATCGATCSNN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_1
0.896 0.896
ONECUT2
M04670_2.00
Homo sapiens
NKATYGATYDN

NHRATCRATMN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_2
0.896 0.896
ONECUT2
M10417_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OC2_Q3
0.896 0.896
ONECUT2
M04668_2.00
Homo sapiens
DTATTGATYN

NRATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_eDBD_Methyl-HT-SELEX
0.896 0.896
ONECUT2
M04671_2.00
Homo sapiens
ACSGATCAATAM

KTATTGATCSGT
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_1
0.896 0.896
ONECUT2
M04672_2.00
Homo sapiens
DTATTGATTDN

NHAATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_2
0.896 0.896
ONECUT3
M02945_2.00
Homo sapiens
DWTATYGATTTTYN

NRAAAATCRATAWH
SELEX
Jolma et al.(2013)
ONECUT3_1
0.889 0.889
ONECUT3
M04677_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_HT-SELEX
0.889 0.889
ONECUT3
M04678_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_Methyl-HT-SELEX
0.889 0.889
ONECUT1
M02943_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_1
0.881 0.881
ONECUT1
M02944_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_2
0.881 0.881
ONECUT1
M03715_2.00
Homo sapiens
HRATCGATAHH

DDTATCGATYD
SELEX
Nitta et al.(2015)
ONECUT1_1
0.881 0.881
ONECUT1
M04673_2.00
Homo sapiens
NNATCGATYN

NRATCGATNN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_HT-SELEX
0.881 0.881
ONECUT1
M04675_2.00
Homo sapiens
NNCGATCGATAN

NTATCGATCGNN
SELEX
Yin et al.(2017)
ONECUT1_FL_HT-SELEX
0.881 0.881
ONECUT1
M09022_2.00
Homo sapiens
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_HUMAN.H11MO.0.B
0.881 0.881
Onecut1
M09026_2.00
Mus musculus
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_MOUSE.H11MO.0.A
0.881 0.881
Onecut1
M09520_2.00
Mus musculus
NRATCRATMN

NKATYGATYN
Misc
Heinz et al.(2010)
Liver-Hnf6_ERP000394
0.881 0.881
ONECUT1
M10418_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q4
0.881 0.881
ONECUT1
M10419_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q6_01
0.881 0.881
ONECUT1
M04674_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_Methyl-HT-SELEX
0.881 0.881
ONECUT1
M04676_2.00
Homo sapiens
RYSRATCAATAM

KTATTGATYSRY
SELEX
Yin et al.(2017)
ONECUT1_FL_Methyl-HT-SELEX
0.881 0.881
ceh-48
M01905_2.00
Caenorhabditis elegans
NNATYGRNN

NNYCRATNN
PBM
Weirauch et al.(2014)
pTH8982
0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EHJ65677 CUT 160 238
EHJ65677 Homeodomain 265 320

Links

Other CUT,Homeodomain family TFs
Other Danaus plexippus TFs

304 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action