CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAR001184
(
Strigamia maritima
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
SMAR001184
T167377_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ct
M06471_2.00
Drosophila melanogaster
YTRAAC
GTTYAR
B1H
Mathelier et al.(2014)
MA0218.1
0.888
0.888
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR001184-PA
CUT
729
802
ANDCLNTLNISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNCI
SMAR001184-PA
CUT
1100
1179
QYTNLNTEDIVKKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKIFLEDENAVHKLVAS
SMAR001184-PA
CUT
1275
1352
TQDLDTQLITTRIKETLLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDPHNVDRLQA
SMAR001184-PA
Homeodomain
1399
1455
KKPRVLFSEEQKEALRLAFALDPYPGTATIEFLAQELRLTARTITNWFHNHRMRLKQ
Links
Other
CUT,Homeodomain
family TFs
Other
Strigamia maritima
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy