CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ceh-44
(
Caenorhabditis elegans
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
WBGene00000464
T167390_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y54F10AM.4a
CUT
596
677
NGHPLNTTEIASHCKRLMIAYNIGQRLFAKHVMNQVVKSQGSLSELLSKPRHWNKLTDKGREAFRRIYGWISDDEAINLLCS
Y54F10AM.4a
CUT
837
916
AYTVLDTDFLVKQIKEFLTMNSISQRQFGEYILGLSQGSVSDLLARPKTWAQLTQKGREPFIRMQLFMDDVEASEENDEK
Y54F10AM.4a
CUT
983
1060
GEEILDTFEIVYQVKGILEENGISPRVFGDEYLHCTSSMCADLMIRTKSFENSKASEKLMYTRMKTFLSDPIAIPLLV
Y54F10AM.4a
Homeodomain
1104
1160
PIQRTVITDYQKDTLRFVFVNEQHPSNELCEQISLKLDMSLRTVQNWFHNHRTRSKA
Links
Other
CUT,Homeodomain
family TFs
Other
Caenorhabditis elegans
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE25185
Caenorhabditis remanei
CRE25185
N
0.876
CBN06506
Caenorhabditis brenneri
CBN06506
N
0.845
CBG09849
Caenorhabditis briggsae
CBG09849
N
0.803
CJA18592
Caenorhabditis japonica
CJA18592
N
0.796