CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cflo_05239--XP_623857.2_APIME
(
Camponotus floridanus
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
Cflo_05239--XP_623857.2_APIME
T167411_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ct
M06471_2.00
Drosophila melanogaster
YTRAAC
GTTYAR
B1H
Mathelier et al.(2014)
MA0218.1
0.924
0.924
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_05239--XP_623857.2_APIME
CUT
458
534
ASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLL
Cflo_05239--XP_623857.2_APIME
CUT
857
936
MYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVAS
Cflo_05239--XP_623857.2_APIME
CUT
1084
1161
TQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQA
Cflo_05239--XP_623857.2_APIME
Homeodomain
1208
1264
KKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQ
Links
Other
CUT,Homeodomain
family TFs
Other
Camponotus floridanus
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy