|
ENSP00000262095-D2
(Bos grunniens)
CUT,Homeodomain
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF02376 (CUT)
PF00046 (Homeobox)
|
IPR003350
IPR001356
|
ENSP00000262095-D2 |
T167418_2.00 |
GigaDB (2015-Oct-22) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
ONECUT2
M02942_2.00 |
Homo sapiens |
DDTATYGATTTTYN |
NRAAAATCRATAHH |
SELEX
Jolma et al.(2013)
ONECUT2_1
|
1.000
|
1.000
|
ONECUT2
M03714_2.00 |
Homo sapiens |
NDDTATCGATYBNN |
NNVRATCGATAHHN |
SELEX
Nitta et al.(2015)
ONECUT2_1
|
1.000
|
1.000
|
ONECUT2
M04667_2.00 |
Homo sapiens |
NNATYGATYN |
NRATCRATNN |
SELEX
Yin et al.(2017)
ONECUT2_eDBD_HT-SELEX
|
1.000
|
1.000
|
ONECUT2
M04669_2.00 |
Homo sapiens |
NNSGATCGATAH |
DTATCGATCSNN |
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_1
|
1.000
|
1.000
|
ONECUT2
M04670_2.00 |
Homo sapiens |
NKATYGATYDN |
NHRATCRATMN |
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_2
|
1.000
|
1.000
|
ONECUT2
M10417_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$OC2_Q3
|
1.000
|
1.000
|
ONECUT2
M04668_2.00 |
Homo sapiens |
DTATTGATYN |
NRATCAATAH |
SELEX
Yin et al.(2017)
ONECUT2_eDBD_Methyl-HT-SELEX
|
1.000
|
1.000
|
ONECUT2
M04671_2.00 |
Homo sapiens |
ACSGATCAATAM |
KTATTGATCSGT |
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_1
|
1.000
|
1.000
|
ONECUT2
M04672_2.00 |
Homo sapiens |
DTATTGATTDN |
NHAATCAATAH |
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_2
|
1.000
|
1.000
|
ONECUT1
M02943_2.00 |
Homo sapiens |
DDTATYGATTTTHN |
NDAAAATCRATAHH |
SELEX
Jolma et al.(2013)
ONECUT1_1
|
0.948
|
0.948
|
ONECUT1
M02944_2.00 |
Homo sapiens |
DDTATYGATTTTHN |
NDAAAATCRATAHH |
SELEX
Jolma et al.(2013)
ONECUT1_2
|
0.948
|
0.948
|
ONECUT1
M03715_2.00 |
Homo sapiens |
HRATCGATAHH |
DDTATCGATYD |
SELEX
Nitta et al.(2015)
ONECUT1_1
|
0.948
|
0.948
|
ONECUT1
M04673_2.00 |
Homo sapiens |
NNATCGATYN |
NRATCGATNN |
SELEX
Yin et al.(2017)
ONECUT1_eDBD_HT-SELEX
|
0.948
|
0.948
|
ONECUT1
M04675_2.00 |
Homo sapiens |
NNCGATCGATAN |
NTATCGATCGNN |
SELEX
Yin et al.(2017)
ONECUT1_FL_HT-SELEX
|
0.948
|
0.948
|
ONECUT1
M09022_2.00 |
Homo sapiens |
NBBATTGATYN |
NRATCAATVVN |
Misc
Kulakovskiy et al.(2013)
HNF6_HUMAN.H11MO.0.B
|
0.948
|
0.948
|
Onecut1
M09026_2.00 |
Mus musculus |
NBBATTGATYN |
NRATCAATVVN |
Misc
Kulakovskiy et al.(2013)
HNF6_MOUSE.H11MO.0.A
|
0.948
|
0.948
|
Onecut1
M09520_2.00 |
Mus musculus |
NRATCRATMN |
NKATYGATYN |
Misc
Heinz et al.(2010)
Liver-Hnf6_ERP000394
|
0.948
|
0.948
|
ONECUT1
M10418_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HNF6_Q4
|
0.948
|
0.948
|
ONECUT1
M10419_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HNF6_Q6_01
|
0.948
|
0.948
|
ONECUT1
M04674_2.00 |
Homo sapiens |
NTATTGATYN |
NRATCAATAN |
SELEX
Yin et al.(2017)
ONECUT1_eDBD_Methyl-HT-SELEX
|
0.948
|
0.948
|
ONECUT1
M04676_2.00 |
Homo sapiens |
RYSRATCAATAM |
KTATTGATYSRY |
SELEX
Yin et al.(2017)
ONECUT1_FL_Methyl-HT-SELEX
|
0.948
|
0.948
|
ONECUT3
M02945_2.00 |
Homo sapiens |
DWTATYGATTTTYN |
NRAAAATCRATAWH |
SELEX
Jolma et al.(2013)
ONECUT3_1
|
0.940
|
0.940
|
ONECUT3
M04677_2.00 |
Homo sapiens |
NNATYGATYN |
NRATCRATNN |
SELEX
Yin et al.(2017)
ONECUT3_eDBD_HT-SELEX
|
0.940
|
0.940
|
ONECUT3
M04678_2.00 |
Homo sapiens |
NTATTGATYN |
NRATCAATAN |
SELEX
Yin et al.(2017)
ONECUT3_eDBD_Methyl-HT-SELEX
|
0.940
|
0.940
|
onecut
M03716_2.00 |
Drosophila melanogaster |
NNVRATCRATAHNN |
NNDTATYGATYBNN |
SELEX
Nitta et al.(2015)
onecut_1
|
0.896
|
0.896
|
onecut
M03717_2.00 |
Drosophila melanogaster |
NNTATYGATTWNN |
NNWAATCRATANN |
SELEX
Nitta et al.(2015)
onecut_2
|
0.896
|
0.896
|
onecut
M06472_2.00 |
Drosophila melanogaster |
HAATCAA |
TTGATTD |
B1H
Mathelier et al.(2014)
MA0235.1
|
0.896
|
0.896
|
ceh-48
M01905_2.00 |
Caenorhabditis elegans |
NNATYGRNN |
NNYCRATNN |
PBM
Weirauch et al.(2014)
pTH8982
|
0.836
|
0.836
|
For this family, TFs with SR scores > 0.700 will likely have a similar motif |