Gfo_R001489 (Geospiza fortis)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		Gfo_R001489 T167427_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SATB1
M10420_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SATB1_Q3 		0.831 0.831
SATB1
M10421_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SATB1_Q5_01 		0.831 0.831
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R001489 CUT 299 378
Gfo_R001489 CUT 422 501
Gfo_R001489 Homeodomain 557 614

Links

Other CUT,Homeodomain family TFs
Other Geospiza fortis TFs

Invalid Input OrderBy

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action