Gfo_R015811 (Geospiza fortis)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		Gfo_R015811 T167431_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SATB1
M10420_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SATB1_Q3 		0.734 0.734
SATB1
M10421_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SATB1_Q5_01 		0.734 0.734
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R015811 CUT 368 447
Gfo_R015811 CUT 491 569
Gfo_R015811 Homeodomain 668 725

Links

Other CUT,Homeodomain family TFs
Other Geospiza fortis TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R015456 Aptenodytes forsteri Afo_R015456 I 0.744
SATB1 Taeniopygia guttata ENSTGUG00000003198 I 0.744
ENSFALG00000009258 Ficedula albicollis ENSFALG00000009258 I 0.744
SATB1 Gallus gallus ENSGALG00000011254 I 0.744
SATB1 Meleagris gallopavo ENSMGAG00000010929 I 0.744
SATB1 Erinaceus europaeus ENSEEUG00000010435 I 0.739
ENSAPLG00000009362 Anas platyrhynchos ENSAPLG00000009362 I 0.739
ENSPPYG00000014077 Pongo abelii ENSPPYG00000014077 I 0.734
SATB1 Procavia capensis ENSPCAG00000008567 I 0.734
ENSNLEG00000000912 Nomascus leucogenys ENSNLEG00000000912 I 0.734
SATB1 Oryctolagus cuniculus ENSOCUG00000007174 I 0.734
SATB1 Otolemur garnettii ENSOGAG00000015441 I 0.734
SATB1 Pan troglodytes ENSPTRG00000014677 I 0.734
SATB1 Sus scrofa ENSSSCG00000011201 I 0.734
ENSP00000333367 Macaca fascicularis ENSP00000333367 I 0.734
Myotis_brandtii_Satb1_10034564 Myotis brandtii Myotis_brandtii_Satb1_10034564 I 0.734
Brh_R001953 Buceros rhinoceros Brh_R001953 I 0.734
SATB1 Tursiops truncatus ENSTTRG00000006209 I 0.734
ENSSHAG00000015368 Sarcophilus harrisii ENSSHAG00000015368 I 0.734
Satb1 Mus musculus ENSMUSG00000023927 I 0.734
Satb1 Rattus norvegicus ENSRNOG00000012942 I 0.734
ENSMPUG00000001406 Mustela putorius furo ENSMPUG00000001406 I 0.734
SATB1 Gorilla gorilla ENSGGOG00000001779 I 0.734
SATB1 Felis catus ENSFCAG00000004295 I 0.734
SATB1 Cavia porcellus ENSCPOG00000007101 I 0.734
SATB1 Callithrix jacchus ENSCJAG00000003645 I 0.734
SATB1 Loxodonta africana ENSLAFG00000009015 I 0.734
SATB1 Homo sapiens ENSG00000182568 D 0.734
SATB1 Microcebus murinus ENSMICG00000017153 I 0.734
ENSMMUG00000019009 Macaca mulatta ENSMMUG00000019009 I 0.734
SATB1 Monodelphis domestica ENSMODG00000014765 I 0.734
SATB1 Myotis lucifugus ENSMLUG00000001860 I 0.734
SATB1 Anolis carolinensis ENSACAG00000007941 I 0.729
Ogr08410 Ophisaurus gracilis Ogr08410 I 0.729
Pvit_16605 Pogona vitticeps Pvit_16605 I 0.729
SATB1 Equus caballus ENSECAG00000023585 I 0.724
SATB1 Choloepus hoffmanni ENSCHOG00000002142 I 0.724
satb1 Xenopus tropicalis XB-GENE-854103 I 0.719
ENSLACG00000005399 Latimeria chalumnae ENSLACG00000005399 I 0.709
ENSOARG00000015604 Ovis aries ENSOARG00000015604 I 0.704
SATB1 Bos taurus ENSBTAG00000021158 I 0.704