fgenesh2_pg.scaffold_130000023 (Branchiostoma floridae)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		fgenesh2_pg.scaffold_130000023 T167452_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_130000023 CUT 458 536
fgenesh2_pg.scaffold_130000023 CUT 746 822
fgenesh2_pg.scaffold_130000023 CUT 895 972
fgenesh2_pg.scaffold_130000023 Homeodomain 1001 1057

Links

Other CUT,Homeodomain family TFs
Other Branchiostoma floridae TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_pg.scaffold_74000125 Branchiostoma floridae fgenesh2_pg.scaffold_74000125 N 1.000
cux2b Danio rerio ENSDARG00000086345 I 0.703