onecut1 (Xenopus tropicalis)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
XB-GENE-480152 T167472_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ONECUT1
M02943_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_1
1.000 1.000
ONECUT1
M02944_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_2
1.000 1.000
ONECUT1
M03715_2.00
Homo sapiens
HRATCGATAHH

DDTATCGATYD
SELEX
Nitta et al.(2015)
ONECUT1_1
1.000 1.000
ONECUT1
M04673_2.00
Homo sapiens
NNATCGATYN

NRATCGATNN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_HT-SELEX
1.000 1.000
ONECUT1
M04675_2.00
Homo sapiens
NNCGATCGATAN

NTATCGATCGNN
SELEX
Yin et al.(2017)
ONECUT1_FL_HT-SELEX
1.000 1.000
ONECUT1
M09022_2.00
Homo sapiens
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_HUMAN.H11MO.0.B
1.000 1.000
Onecut1
M09026_2.00
Mus musculus
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_MOUSE.H11MO.0.A
1.000 1.000
Onecut1
M09520_2.00
Mus musculus
NRATCRATMN

NKATYGATYN
Misc
Heinz et al.(2010)
Liver-Hnf6_ERP000394
1.000 1.000
ONECUT1
M10418_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q4
1.000 1.000
ONECUT1
M10419_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q6_01
1.000 1.000
ONECUT1
M04674_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_Methyl-HT-SELEX
1.000 1.000
ONECUT1
M04676_2.00
Homo sapiens
RYSRATCAATAM

KTATTGATYSRY
SELEX
Yin et al.(2017)
ONECUT1_FL_Methyl-HT-SELEX
1.000 1.000
ONECUT2
M02942_2.00
Homo sapiens
DDTATYGATTTTYN

NRAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT2_1
0.948 0.948
ONECUT2
M03714_2.00
Homo sapiens
NDDTATCGATYBNN

NNVRATCGATAHHN
SELEX
Nitta et al.(2015)
ONECUT2_1
0.948 0.948
ONECUT2
M04667_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT2_eDBD_HT-SELEX
0.948 0.948
ONECUT2
M04669_2.00
Homo sapiens
NNSGATCGATAH

DTATCGATCSNN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_1
0.948 0.948
ONECUT2
M04670_2.00
Homo sapiens
NKATYGATYDN

NHRATCRATMN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_2
0.948 0.948
ONECUT2
M10417_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OC2_Q3
0.948 0.948
ONECUT2
M04668_2.00
Homo sapiens
DTATTGATYN

NRATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_eDBD_Methyl-HT-SELEX
0.948 0.948
ONECUT2
M04671_2.00
Homo sapiens
ACSGATCAATAM

KTATTGATCSGT
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_1
0.948 0.948
ONECUT2
M04672_2.00
Homo sapiens
DTATTGATTDN

NHAATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_2
0.948 0.948
ONECUT3
M02945_2.00
Homo sapiens
DWTATYGATTTTYN

NRAAAATCRATAWH
SELEX
Jolma et al.(2013)
ONECUT3_1
0.918 0.918
ONECUT3
M04677_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_HT-SELEX
0.918 0.918
ONECUT3
M04678_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_Methyl-HT-SELEX
0.918 0.918
onecut
M03716_2.00
Drosophila melanogaster
NNVRATCRATAHNN

NNDTATYGATYBNN
SELEX
Nitta et al.(2015)
onecut_1
0.881 0.881
onecut
M03717_2.00
Drosophila melanogaster
NNTATYGATTWNN

NNWAATCRATANN
SELEX
Nitta et al.(2015)
onecut_2
0.881 0.881
onecut
M06472_2.00
Drosophila melanogaster
HAATCAA

TTGATTD
B1H
Mathelier et al.(2014)
MA0235.1
0.881 0.881
ceh-48
M01905_2.00
Caenorhabditis elegans
NNATYGRNN

NNYCRATNN
PBM
Weirauch et al.(2014)
pTH8982
0.813 0.813
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI35776 CUT 281 359
AAI35776 Homeodomain 414 468

Links

Other CUT,Homeodomain family TFs
Other Xenopus tropicalis TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AB08896.1 Alternaria brassicicola AB08896.1 N 0.000
M378DRAFT_155487 Amanita muscaria M378DRAFT_155487 I 0.000
M378DRAFT_42891 Amanita muscaria M378DRAFT_42891 I 0.000
COCC4DRAFT_125132 Bipolaris maydis COCC4DRAFT_125132 I 0.000
COCMIDRAFT_88977 Bipolaris oryzae COCMIDRAFT_88977 I 0.000
COCSADRAFT_159051 Bipolaris sorokiniana COCSADRAFT_159051 I 0.000
BDDG_02246 Blastomyces dermatitidis BDDG_02246 I 0.000
CaO19.10341 Candida albicans CaO19.10341 I 0.000
CD36_27640 Candida dubliniensis CD36_27640 I 0.000
G210_0578 Candida maltosa G210_0578 I 0.000
CTRG_00834 Candida tropicalis CTRG_00834 I 0.000
CIMG_12783 Coccidioides immitis CIMG_12783 I 0.000
CPC735_049570 Coccidioides posadasii CPC735_049570 I 0.000
L804_03658 Cryptococcus gattii L804_03658 I 0.000
CNG02110 Cryptococcus neoformans CNG02110 I 0.000
GALMADRAFT_33159 Galerina marginata GALMADRAFT_33159 I 0.000
CMQ_1586 Grosmannia clavigera CMQ_1586 I 0.000
HCBG_03514 Histoplasma capsulatum HCBG_03514 I 0.000
HCBG_03464 Histoplasma capsulatum HCBG_03464 I 0.000
HYDPIDRAFT_113320 Hydnomerulius pinastri HYDPIDRAFT_113320 I 0.000
LEMA_P114390.1 Leptosphaeria maculans LEMA_P114390.1 I 0.000
MELLADRAFT_111305 Melampsora laricipopulina MELLADRAFT_111305 I 0.000
E5Q_02264 Mixia osmundae E5Q_02264 N 0.000
E5Q_00699 Mixia osmundae E5Q_00699 I 0.000
Moror_1142 Moniliophthora roreri Moror_1142 N 0.000
Moror_11417 Moniliophthora roreri Moror_11417 N 0.000
fgeneshMC_pg.3_#_381 Mucor circinelloides fgeneshMC_pg.3_#_381 N 0.000
fgeneshMC_pg.2_#_1032 Mucor circinelloides fgeneshMC_pg.2_#_1032 N 0.000
PABG_03121 Paracoccidioides brasiliensis PABG_03121 I 0.000
PAAG_02636 Paracoccidioides sp lutzii PAAG_02636 I 0.000
PAXINDRAFT_17515 Paxillus involutus PAXINDRAFT_17515 I 0.000
PAXRUDRAFT_47613 Paxillus rubicundulus PAXRUDRAFT_47613 I 0.000
PHACADRAFT_81332 Phanerochaete carnosa PHACADRAFT_81332 N 0.000
fgenesh1_pg.C_scaffold_15000082 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_15000082 N 0.000
fgeneshPB_pg.1__316 Phycomyces blakesleeanus fgeneshPB_pg.1__316 N 0.000
estExt_fgenesh1_pg.C_chr_3.10092 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10092 I 0.000
PIIN_01973 Piriformospora indica PIIN_01973 I 0.000
PLEOSDRAFT_1016849 Pleurotus ostreatus PLEOSDRAFT_1016849 N 0.000
PLEOSDRAFT_12123 Pleurotus ostreatus PLEOSDRAFT_12123 I 0.000
PAN0_018c5621 Pseudozyma antarctica PAN0_018c5621 N 0.000
PaG_05617 Pseudozyma aphidis PaG_05617 N 0.000
PSEUBRA_SCAF20g03099 Pseudozyma brasiliensis PSEUBRA_SCAF20g03099 N 0.000
PTT_09966 Pyrenophora teres PTT_09966 N 0.000
PTRG_07337 Pyrenophora triticirepentis PTRG_07337 N 0.000
GLOINDRAFT_29935 Rhizophagus irregularis GLOINDRAFT_29935 N 0.000
RO3G_10625 Rhizopus oryzae RO3G_10625 N 0.000
RO3G_03011 Rhizopus oryzae RO3G_03011 N 0.000
RHTO_01537 Rhodosporidium toruloides RHTO_01537 N 0.000
PICST_67218 Scheffersomyces stipitis PICST_67218 I 0.000
SCHCODRAFT_111683 Schizophyllum commune SCHCODRAFT_111683 N 0.000
SPAPADRAFT_59824 Spathaspora passalidarum SPAPADRAFT_59824 I 0.000
M422DRAFT_110441 Sphaerobolus stellatus M422DRAFT_110441 N 0.000
sr16650 Sporisorium reilianum sr16650 N 0.000
S40285_04294 Stachybotrys chlorohalonata S40285_04294 N 0.000
CY34DRAFT_56447 Suillus luteus CY34DRAFT_56447 N 0.000
CY34DRAFT_31998 Suillus luteus CY34DRAFT_31998 I 0.000
TDEL_0C04960 Torulaspora delbrueckii TDEL_0C04960 I 0.000
fgeneshTM_pg.8_#_254 Tremella mesenterica fgeneshTM_pg.8_#_254 I 0.000
UHOR_08562 Ustilago hordei UHOR_08562 N 0.000
J056_002766 Wallemia ichthyophaga J056_002766 N 0.000
BN7_1833 Wickerhamomyces ciferrii BN7_1833 I 0.000