CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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csin100103
(
Clonorchis sinensis
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
csin100103
T167534_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
csin100103
CUT
432
508
SSVTLDTAKLVDEVRRRLLFLNVSRRMLSSELKGTNYRTLSYLLRKPKPWSQLSSHAREIYLQLDTWLKSDANAAEG
csin100103
CUT
1024
1098
PELDTWDLCIRTKNYLRRHNVSQRLFAEAVFGMSEAWVNDLLNRTERWASLTPRSRLAYARLYVWLQQPNPMEPI
csin100103
Homeodomain
1310
1366
GRNRIVFTPAQKEALVATFNRHPYPPVDKLRELARQLDLNYKTVLHWFHNRRMRSPK
Links
Other
CUT,Homeodomain
family TFs
Other
Clonorchis sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
imp3
Danio rerio
ENSDARG00000069287
N
0.000
LCUP013864
Lucilia cuprina
LCUP013864
N
0.000
MESCA002939
Megaselia scalaris
MESCA002939
N
0.000
RSKR_0000007000
Rhabditophanes kr3021
RSKR_0000007000
N
0.000
SPAL_0001227600
Strongyloides papillosus
SPAL_0001227600
N
0.000
SSTP_0001206600
Strongyloides stercoralis
SSTP_0001206600
N
0.000
SVE_0222200
Strongyloides venezuelensis
SVE_0222200
N
0.000