ECPE_0001445601 (Echinostoma caproni)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ECPE_0001445601 T167549_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ONECUT1
M02943_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_1
0.924 0.924
ONECUT1
M02944_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_2
0.924 0.924
onecut
M03716_2.00
Drosophila melanogaster
NNVRATCRATAHNN

NNDTATYGATYBNN
SELEX
Nitta et al.(2015)
onecut_1
0.924 0.924
onecut
M03717_2.00
Drosophila melanogaster
NNTATYGATTWNN

NNWAATCRATANN
SELEX
Nitta et al.(2015)
onecut_2
0.924 0.924
ONECUT1
M03715_2.00
Homo sapiens
HRATCGATAHH

DDTATCGATYD
SELEX
Nitta et al.(2015)
ONECUT1_1
0.924 0.924
ONECUT1
M04673_2.00
Homo sapiens
NNATCGATYN

NRATCGATNN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_HT-SELEX
0.924 0.924
ONECUT1
M04675_2.00
Homo sapiens
NNCGATCGATAN

NTATCGATCGNN
SELEX
Yin et al.(2017)
ONECUT1_FL_HT-SELEX
0.924 0.924
onecut
M06472_2.00
Drosophila melanogaster
HAATCAA

TTGATTD
B1H
Mathelier et al.(2014)
MA0235.1
0.924 0.924
ONECUT1
M09022_2.00
Homo sapiens
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_HUMAN.H11MO.0.B
0.924 0.924
Onecut1
M09026_2.00
Mus musculus
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_MOUSE.H11MO.0.A
0.924 0.924
Onecut1
M09520_2.00
Mus musculus
NRATCRATMN

NKATYGATYN
Misc
Heinz et al.(2010)
Liver-Hnf6_ERP000394
0.924 0.924
ONECUT1
M10418_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q4
0.924 0.924
ONECUT1
M10419_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q6_01
0.924 0.924
ONECUT1
M04674_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_Methyl-HT-SELEX
0.924 0.924
ONECUT1
M04676_2.00
Homo sapiens
RYSRATCAATAM

KTATTGATYSRY
SELEX
Yin et al.(2017)
ONECUT1_FL_Methyl-HT-SELEX
0.924 0.924
ONECUT2
M02942_2.00
Homo sapiens
DDTATYGATTTTYN

NRAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT2_1
0.913 0.913
ONECUT2
M03714_2.00
Homo sapiens
NDDTATCGATYBNN

NNVRATCGATAHHN
SELEX
Nitta et al.(2015)
ONECUT2_1
0.913 0.913
ONECUT2
M04667_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT2_eDBD_HT-SELEX
0.913 0.913
ONECUT2
M04669_2.00
Homo sapiens
NNSGATCGATAH

DTATCGATCSNN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_1
0.913 0.913
ONECUT2
M04670_2.00
Homo sapiens
NKATYGATYDN

NHRATCRATMN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_2
0.913 0.913
ONECUT2
M10417_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OC2_Q3
0.913 0.913
ONECUT2
M04668_2.00
Homo sapiens
DTATTGATYN

NRATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_eDBD_Methyl-HT-SELEX
0.913 0.913
ONECUT2
M04671_2.00
Homo sapiens
ACSGATCAATAM

KTATTGATCSGT
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_1
0.913 0.913
ONECUT2
M04672_2.00
Homo sapiens
DTATTGATTDN

NHAATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_2
0.913 0.913
ONECUT3
M02945_2.00
Homo sapiens
DWTATYGATTTTYN

NRAAAATCRATAWH
SELEX
Jolma et al.(2013)
ONECUT3_1
0.902 0.902
ONECUT3
M04677_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_HT-SELEX
0.902 0.902
ONECUT3
M04678_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_Methyl-HT-SELEX
0.902 0.902
ceh-48
M01905_2.00
Caenorhabditis elegans
NNATYGRNN

NNYCRATNN
PBM
Weirauch et al.(2014)
pTH8982
0.880 0.880
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ECPE_0001445601-mRNA-1 CUT 1 62
ECPE_0001445601-mRNA-1 Homeodomain 86 115

Links

Other CUT,Homeodomain family TFs
Other Echinostoma caproni TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB006352 Anopheles albimanus AALB006352 I 0.924
AATE002650 Anopheles atroparvus AATE002650 I 0.924
ADAC006269 Anopheles darlingi ADAC006269 I 0.924
ADIR000966 Anopheles dirus ADIR000966 I 0.924
AFUN011577 Anopheles funestus AFUN011577 I 0.924
AMIN002125 Anopheles minimus AMIN002125 I 0.924
ASIS013617 Anopheles sinensis ASIS013617 I 0.924
ASTEI06198 Anopheles stephensi ASTEI06198 I 0.924
GB44974 Apis mellifera GB44974 I 0.935
ENSAMXG00000006507 Astyanax mexicanus ENSAMXG00000006507 I 0.902
ENSAMXG00000015765 Astyanax mexicanus ENSAMXG00000015765 I 0.913
ceh-38 Caenorhabditis elegans WBGene00000459 I 0.761
ceh-48 Caenorhabditis elegans WBGene00015934 D 0.880
CJA05277 Caenorhabditis japonica CJA05277 I 0.891
CRE24704 Caenorhabditis remanei CRE24704 I 0.880
CRE22230 Caenorhabditis remanei CRE22230 I 0.880
ONECUT1 Callithrix jacchus ENSCJAG00000000848 I 0.902
ENSCSAVG00000000071 Ciona savignyi ENSCSAVG00000000071 I 0.924
onecut3a Danio rerio ENSDARG00000056395 I 0.902
onecut3b Danio rerio ENSDARG00000091059 I 0.902
GH24019 Drosophila grimshawi FBgn0131475 I 0.924
ECANG7_03058 Echinococcus canadensis ECANG7_03058 I 0.870
EmuJ_001065200 Echinococcus multilocularis EmuJ_001065200 I 0.870
ENSFALG00000011399 Ficedula albicollis ENSFALG00000011399 I 0.902
ENSGMOG00000012200 Gadus morhua ENSGMOG00000012200 I 0.880
ENSGMOG00000005103 Gadus morhua ENSGMOG00000005103 I 0.783
ONECUT3 Gallus gallus ENSGALG00000028081 I 0.902
onecutl Gasterosteus aculeatus ENSGACG00000013501 I 0.793
onecut3a Gasterosteus aculeatus ENSGACG00000012671 I 0.902
GPLIN_001402700 Globodera pallida GPLIN_001402700 I 0.913
Hsal_07483--XP_624996.2_APIME Harpegnathos saltator Hsal_07483--XP_624996.2_APIME I 0.935
HelroG142791 Helobdella robusta HelroG142791 I 0.924
HelroG151232 Helobdella robusta HelroG151232 I 0.772
TTAC_0000985401 Hydatigera taeniaeformis TTAC_0000985401 I 0.978
HmN_000916800 Hymenolepis microstoma HmN_000916800 I 0.848
HNAJ_0001098701 Hymenolepis nana HNAJ_0001098701 I 0.848
ENSLACG00000016574 Latimeria chalumnae ENSLACG00000016574 I 0.913
ENSLACG00000017269 Latimeria chalumnae ENSLACG00000017269 I 0.902
ENSLOCG00000007915 Lepisosteus oculatus ENSLOCG00000007915 I 0.815
MhA1_Contig20.frz3.gene53 Meloidogyne hapla MhA1_Contig20.frz3.gene53 I 0.826
Onecut3 Mus musculus ENSMUSG00000045518 I 0.902
NV10665 Nasonia vitripennis NV10665 I 0.935
NECAME_06517 Necator americanus NECAME_06517 N 0.739
ENSOPRG00000007398 Ochotona princeps ENSOPRG00000007398 I 0.848
ENSONIG00000004792 Oreochromis niloticus ENSONIG00000004792 I 0.902
ENSONIG00000002661 Oreochromis niloticus ENSONIG00000002661 I 0.924
onecut1 Oryzias latipes ENSORLG00000012932 I 0.924
onecut3a Oryzias latipes ENSORLG00000004983 I 0.902
PHUM228480 Pediculus humanus PHUM228480 I 0.837
ENSPFOG00000001415 Poecilia formosa ENSPFOG00000001415 I 0.902
ENSPFOG00000016688 Poecilia formosa ENSPFOG00000016688 I 0.924
Pvit_09823 Pogona vitticeps Pvit_09823 I 0.902
scaffold421-EXSNAP2012.16 Pristionchus exspectatus scaffold421-EXSNAP2012.16 I 0.761
PXEA_0000259701 Protopolystoma xenopodis PXEA_0000259701 I 0.703
SMU15040258 Schmidtea mediterranea SMU15040258 I 0.880
SMU15004106 Schmidtea mediterranea SMU15004106 I 0.957
L596_g1964 Steinernema carpocapsae L596_g1964 I 0.772
TASK_0000912001 Taenia asiatica TASK_0000912001 I 0.870
TsM_000579900 Taenia solium TsM_000579900 I 0.870
ONECUT3 Taeniopygia guttata ENSTGUG00000000213 I 0.902
onecut3a Takifugu rubripes ENSTRUG00000017862 I 0.902
onecut3b Takifugu rubripes ENSTRUG00000008911 I 0.707
onecut2 Takifugu rubripes ENSTRUG00000000677 I 0.913
onecut1 Tetraodon nigroviridis ENSTNIG00000011370 I 0.913
TRE_0001030801 Trichobilharzia regenti TRE_0001030801 I 0.706
onecut3 Xenopus tropicalis XB-GENE-484505 I 0.902
ENSXMAG00000012769 Xiphophorus maculatus ENSXMAG00000012769 I 0.902
ENSXMAG00000018128 Xiphophorus maculatus ENSXMAG00000018128 I 0.924