CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0000327901
(
Haemonchus placei
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
HPLM_0000327901
T167570_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0000327901-mRNA-1
CUT
440
518
GSRALNTAEIARQCKRLMVAYNIGQRLFAKYVMNQSQGSLSELLSKPRHWSKLTDKGREAFRRIYGWISDAEAVDLLCS
HPLM_0000327901-mRNA-1
CUT
639
713
MNSRMRIGLSPITQEQFEMFGHIDTDDVVRQGSVSDLLARPKQWNMLTQKGREPFIRMKLFMREVSQSAKKDIVQ
HPLM_0000327901-mRNA-1
CUT
783
862
DAESVDTALLVRKVKDRLHLHGISQRLFGEAVLGISAGGCSELFLRPRRWSTLSVRGREPFEKMKAWLADKEAVQRLLVR
HPLM_0000327901-mRNA-1
Homeodomain
894
950
KVQRTIITEQQKEALRFVFQHEHHPSQKTVELLSLKLNLNIRTVNNWFHNHRTRQKA
Links
Other
CUT,Homeodomain
family TFs
Other
Haemonchus placei
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI00322800
Haemonchus contortus
HCOI00322800
N
0.890
HCOI01335400
Haemonchus contortus
HCOI01335400
N
0.890
HPBE_0001112201
Heligmosomoides bakeri
HPBE_0001112201
N
0.834
DICVIV_07279
Dictyocaulus viviparus
DICVIV_07279
N
0.828
ANCCAN_05253
Ancylostoma caninum
ANCCAN_05253
N
0.828
ANCCEY_12750
Ancylostoma ceylanicum
ANCCEY_12750
N
0.828
ACOC_0000255501
Angiostrongylus costaricensis
ACOC_0000255501
N
0.723
Hba_20667
Heterorhabditis bacteriophora
Hba_20667
N
0.703