CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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L889_g7078
(
Steinernema feltiae
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
L889_g7078
T167576_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g7078.t1
CUT
269
346
GRALNTGETANHCKRLMVGYNIGQRLFAKYVMNQSQGSLSELLSKPRHWNKLTEKGREAFRRIYAWISDPQAIELLCS
L889_g7078.t1
CUT
530
607
KYPYLNTEQVVREVKEYLQSNCVSQRRFGEQVLGLSQGSVSDLLGRPKSWASLTQKGREPFIRMKLFLDDSAQMQQFA
L889_g7078.t1
CUT
656
736
SGQEIDVYEVVKRVKALLQSRQISQRALGEYVLQINRQSTVSALLSRPIPWKMLSAKNRKPYVILSEWLKDPSGIDDLKKK
L889_g7078.t1
Homeodomain
786
842
KVVRTVINQKQKEALLMVYQHDQHPSAKMIEQLAEKLNLSTRTVTNWFHNHRTRQKA
Links
Other
CUT,Homeodomain
family TFs
Other
Steinernema feltiae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L898_g13376
Steinernema monticolum
L898_g13376
N
0.934
L893_g20317
Steinernema glaseri
L893_g20317
N
0.924
L596_g7632
Steinernema carpocapsae
L596_g7632
N
0.924
L892_g10079
Steinernema scapterisci
L892_g10079
N
0.921