L893_g27707 (Steinernema glaseri)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
L893_g27707 T167581_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ceh-48
M01905_2.00
Caenorhabditis elegans
NNATYGRNN

NNYCRATNN
PBM
Weirauch et al.(2014)
pTH8982
0.911 0.911
onecut
M03716_2.00
Drosophila melanogaster
NNVRATCRATAHNN

NNDTATYGATYBNN
SELEX
Nitta et al.(2015)
onecut_1
0.896 0.896
onecut
M03717_2.00
Drosophila melanogaster
NNTATYGATTWNN

NNWAATCRATANN
SELEX
Nitta et al.(2015)
onecut_2
0.896 0.896
onecut
M06472_2.00
Drosophila melanogaster
HAATCAA

TTGATTD
B1H
Mathelier et al.(2014)
MA0235.1
0.896 0.896
ONECUT2
M02942_2.00
Homo sapiens
DDTATYGATTTTYN

NRAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT2_1
0.859 0.859
ONECUT2
M03714_2.00
Homo sapiens
NDDTATCGATYBNN

NNVRATCGATAHHN
SELEX
Nitta et al.(2015)
ONECUT2_1
0.859 0.859
ONECUT2
M04667_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT2_eDBD_HT-SELEX
0.859 0.859
ONECUT2
M04669_2.00
Homo sapiens
NNSGATCGATAH

DTATCGATCSNN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_1
0.859 0.859
ONECUT2
M04670_2.00
Homo sapiens
NKATYGATYDN

NHRATCRATMN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_2
0.859 0.859
ONECUT2
M10417_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OC2_Q3
0.859 0.859
ONECUT2
M04668_2.00
Homo sapiens
DTATTGATYN

NRATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_eDBD_Methyl-HT-SELEX
0.859 0.859
ONECUT2
M04671_2.00
Homo sapiens
ACSGATCAATAM

KTATTGATCSGT
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_1
0.859 0.859
ONECUT2
M04672_2.00
Homo sapiens
DTATTGATTDN

NHAATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_2
0.859 0.859
ONECUT1
M02943_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_1
0.837 0.837
ONECUT1
M02944_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_2
0.837 0.837
ONECUT3
M02945_2.00
Homo sapiens
DWTATYGATTTTYN

NRAAAATCRATAWH
SELEX
Jolma et al.(2013)
ONECUT3_1
0.837 0.837
ONECUT1
M03715_2.00
Homo sapiens
HRATCGATAHH

DDTATCGATYD
SELEX
Nitta et al.(2015)
ONECUT1_1
0.837 0.837
ONECUT1
M04673_2.00
Homo sapiens
NNATCGATYN

NRATCGATNN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_HT-SELEX
0.837 0.837
ONECUT1
M04675_2.00
Homo sapiens
NNCGATCGATAN

NTATCGATCGNN
SELEX
Yin et al.(2017)
ONECUT1_FL_HT-SELEX
0.837 0.837
ONECUT3
M04677_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_HT-SELEX
0.837 0.837
ONECUT1
M09022_2.00
Homo sapiens
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_HUMAN.H11MO.0.B
0.837 0.837
Onecut1
M09026_2.00
Mus musculus
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_MOUSE.H11MO.0.A
0.837 0.837
Onecut1
M09520_2.00
Mus musculus
NRATCRATMN

NKATYGATYN
Misc
Heinz et al.(2010)
Liver-Hnf6_ERP000394
0.837 0.837
ONECUT1
M10418_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q4
0.837 0.837
ONECUT1
M10419_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q6_01
0.837 0.837
ONECUT1
M04674_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_Methyl-HT-SELEX
0.837 0.837
ONECUT1
M04676_2.00
Homo sapiens
RYSRATCAATAM

KTATTGATYSRY
SELEX
Yin et al.(2017)
ONECUT1_FL_Methyl-HT-SELEX
0.837 0.837
ONECUT3
M04678_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_Methyl-HT-SELEX
0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g27707.t1 CUT 355 433
L893_g27707.t1 Homeodomain 454 509

Links

Other CUT,Homeodomain family TFs
Other Steinernema glaseri TFs

306 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PPAI002844 Phlebotomus papatasi PPAI002844 I 0.000
MCINX000525 Melitaea cinxia MCINX000525 I 0.000
RPRC002110 Rhodnius prolixus RPRC002110 I 0.000
TC000088 Tribolium castaneum TC000088 I 0.000
YQE_03736 Dendroctonus ponderosae YQE_03736 I 0.000
Hsal_05831--XP_394233.3_APIME Harpegnathos saltator Hsal_05831--XP_394233.3_APIME I 0.000
HHAL003628-PA Halyomorpha halys HHAL003628-PA I 0.000
LCUP014936 Lucilia cuprina LCUP014936 I 0.000
LLOJ006614 Lutzomyia longipalpis LLOJ006614 I 0.000
KGM_10878 Danaus plexippus KGM_10878 I 0.000
ISCW007040 Ixodes scapularis ISCW007040 I 0.000
ACEP20954 Atta cephalotes ACEP20954 I 0.000
GJ11427 Drosophila virilis FBgn0198685 I 0.000
GB48028 Apis mellifera GB48028 I 0.000
HMEL008784 Heliconius melpomene HMEL008784 I 0.000
AFAF004824 Anopheles farauti AFAF004824 N 0.000
AFUN011810 Anopheles funestus AFUN011810 N 0.000
AMEC012294 Anopheles melas AMEC012294 N 0.000
AMEM015248 Anopheles merus AMEM015248 N 0.000
AMIN011013 Anopheles minimus AMIN011013 N 0.000
AQUA011172 Anopheles quadriannulatus AQUA011172 N 0.000
ASTEI06385 Anopheles stephensi ASTEI06385 N 0.000
AAEL012562 Aedes aegypti AAEL012562 N 0.000
AEPI008163 Anopheles epiroticus AEPI008163 N 0.000
ADIR007538 Anopheles dirus ADIR007538 N 0.000
CPIJ002146 Culex quinquefasciatus CPIJ002146 N 0.000
CLK Anopheles gambiae AGAP005711 N 0.000
ADAC005680 Anopheles darlingi ADAC005680 N 0.000
AALB004151 Anopheles albimanus AALB004151 N 0.000
AARA005712 Anopheles arabiensis AARA005712 N 0.000
AATE001068 Anopheles atroparvus AATE001068 N 0.000
ACHR008870 Anopheles christyi ACHR008870 N 0.000
ACOM031194 Anopheles coluzzii ACOM031194 N 0.000
CpipJ_CPIJ002146 Culex pipiens CpipJ_CPIJ002146 N 0.000