CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g02014
(
Litomosoides sigmodontis
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
nLs.2.1.2.g02014
T167595_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t02014-RA
CUT
531
609
GSKALNTTEIAKQCKHLMVTHNIGQRLFAKYIMNQSQGSLSELLSKPRHWNKLTDKGREAFRRMYGWVSDPKAIELLCN
nLs.2.1.2.t02014-RA
CUT
797
871
RYPVLDTEDIVRQIKDFLCLNSISQRQFGEHVLGLSQGSVSDLLARPKPWAMLTQKGREPFVRMQLFLNEAQSLV
nLs.2.1.2.t02014-RA
CUT
954
1030
LMTDTNEIARQVKDRLHSSGISQKTFGDVVLGVSPGGVSELLTKPKTWEQLSPRARDLYMKMSEWLGELDGNRRMQD
nLs.2.1.2.t02014-RA
Homeodomain
1083
1139
KAQRTVITDQQKEALKHVFERDQHPNQRTIEQLSQTLSLSTRTVSNWFHNYRTRQKA
Links
Other
CUT,Homeodomain
family TFs
Other
Litomosoides sigmodontis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OFLC_0001472101
Onchocerca flexuosa
OFLC_0001472101
N
0.972
nOo.2.0.1.g00487
Onchocerca ochengi
nOo.2.0.1.g00487
N
0.972
WBGene00245175
Onchocerca volvulus
WBGene00245175
N
0.968
nDi.2.2.2.g00652
Dirofilaria immitis
nDi.2.2.2.g00652
N
0.961
nAv.1.0.1.g08192
Acanthocheilonema viteae
nAv.1.0.1.g08192
N
0.947
LOAG_00892
Loa loa
LOAG_00892
N
0.940
Bm6810
Brugia malayi
Bm6810
N
0.934
WUBG_03061
Wuchereria bancrofti
WUBG_03061
N
0.877