CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g02844
(
Romanomermis culicivorax
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
nRc.2.0.1.g02844
T167598_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t02844-RA
CUT
389
467
DDIFIDTKDLCNRIAYELKAHSIPQAVFAERVLCRSQGTLSDLLRNPKPWNKLKSGRETFRRMYYWLKLPVDQRLAILE
nRc.2.0.1.t02844-RA
Homeodomain
583
646
RPRLVFTDIQKRTLQTEKKNTILVAIFKETQRPSREMQQTIAEHLGLDLSTVQNFFMNARRRTR
Links
Other
CUT,Homeodomain
family TFs
Other
Romanomermis culicivorax
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMUV_0000999101
Syphacia muris
SMUV_0000999101
I
0.785
EVEC_0000332701
Enterobius vermicularis
EVEC_0000332701
I
0.785
CJA03729
Caenorhabditis japonica
CJA03729
I
0.778
ceh-38
Caenorhabditis elegans
WBGene00000459
I
0.778
CBG11192
Caenorhabditis briggsae
CBG11192
I
0.778
CBN23227
Caenorhabditis brenneri
CBN23227
I
0.778
L596_g1964
Steinernema carpocapsae
L596_g1964
I
0.770
L893_g20975
Steinernema glaseri
L893_g20975
I
0.770
L889_g27415
Steinernema feltiae
L889_g27415
I
0.770
scaffold421-EXSNAP2012.16
Pristionchus exspectatus
scaffold421-EXSNAP2012.16
I
0.770
CRE26474
Caenorhabditis remanei
CRE26474
I
0.770
L898_g12845
Steinernema monticolum
L898_g12845
I
0.770
HCOI01220000
Haemonchus contortus
HCOI01220000
I
0.763
ANCDUO_06286
Ancylostoma duodenale
ANCDUO_06286
I
0.763
DICVIV_06959
Dictyocaulus viviparus
DICVIV_06959
I
0.763
ASU_08868
Ascaris suum
ASU_08868
I
0.759
nLs.2.1.2.g01435
Litomosoides sigmodontis
nLs.2.1.2.g01435
I
0.756
TCLT_0000779601
Thelazia callipaeda
TCLT_0000779601
I
0.756
nOo.2.0.1.g10331
Onchocerca ochengi
nOo.2.0.1.g10331
I
0.756
nDi.2.2.2.g00186
Dirofilaria immitis
nDi.2.2.2.g00186
I
0.756
nAv.1.0.1.g09678
Acanthocheilonema viteae
nAv.1.0.1.g09678
I
0.756
EEL_0000016301
Elaeophora elaphi
EEL_0000016301
I
0.756
LOAG_08712
Loa loa
LOAG_08712
I
0.756
Bm3512
Brugia malayi
Bm3512
I
0.756
WBGene00247461
Onchocerca volvulus
WBGene00247461
I
0.756
BTMF_0001011301
Brugia timori
BTMF_0001011301
I
0.756
DME_0000092301
Dracunculus medinensis
DME_0000092301
I
0.756
GPLIN_001052100
Globodera pallida
GPLIN_001052100
I
0.748
NECAME_06517
Necator americanus
NECAME_06517
N
0.748
L892_g29126
Steinernema scapterisci
L892_g29126
N
0.748
Minc16757
Meloidogyne incognita
Minc16757
I
0.743
MhA1_Contig512.frz3.fgene1
Meloidogyne hapla
MhA1_Contig512.frz3.fgene1
I
0.743
WUBG_00613
Wuchereria bancrofti
WUBG_00613
N
0.741
ANCCEY_12232
Ancylostoma ceylanicum
ANCCEY_12232
N
0.741
BXY_1717400
Bursaphelenchus xylophilus
BXY_1717400
I
0.741
RSKR_0000794200
Rhabditophanes kr3021
RSKR_0000794200
N
0.719