CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g04977
(
Romanomermis culicivorax
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
nRc.2.0.1.g04977
T167599_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t04977-RA
CUT
575
650
PPVETFKVAVHCRQVLNDFNIGQRLLAKCVLGQSQGAVSELLSKPKTWEKLTEKGKESFRRIEAWLADEPSISILR
nRc.2.0.1.t04977-RA
CUT
906
985
KYGEISTEQLVHEIKEYLCKFSISQRLFGEQVLGLSQGSVSDLLARPKPWSSLTQKGREPFVRMKLFLNDEQAIKSLMEK
nRc.2.0.1.t04977-RA
CUT
1099
1176
NGEIIDTENLVKRVKECLLAHNIGQKVFGQAVLGMSQGAVSDLLSKSKTWSGLSFKGKEAFIRMQIWREDVERIEKIV
nRc.2.0.1.t04977-RA
Homeodomain
1260
1314
SNNHINDEQKELLRKIYEQNQEPDQNLTLKIAQKLNLSFKIVSNWFNNRNMRRRA
Links
Other
CUT,Homeodomain
family TFs
Other
Romanomermis culicivorax
TFs
0 Related TFs
">No related TF found