PXEA_0000259701 (Protopolystoma xenopodis)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		PXEA_0000259701 T167605_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ONECUT1
M02943_2.00 		Homo sapiens
DDTATYGATTTTHN
NDAAAATCRATAHH		 SELEX
Jolma et al.(2013)
ONECUT1_1 		0.879 0.879
ONECUT1
M02944_2.00 		Homo sapiens
DDTATYGATTTTHN
NDAAAATCRATAHH		 SELEX
Jolma et al.(2013)
ONECUT1_2 		0.879 0.879
ONECUT1
M03715_2.00 		Homo sapiens
HRATCGATAHH
DDTATCGATYD		 SELEX
Nitta et al.(2015)
ONECUT1_1 		0.879 0.879
ONECUT1
M04673_2.00 		Homo sapiens
NNATCGATYN
NRATCGATNN		 SELEX
Yin et al.(2017)
ONECUT1_eDBD_HT-SELEX 		0.879 0.879
ONECUT1
M04675_2.00 		Homo sapiens
NNCGATCGATAN
NTATCGATCGNN		 SELEX
Yin et al.(2017)
ONECUT1_FL_HT-SELEX 		0.879 0.879
ONECUT1
M09022_2.00 		Homo sapiens
NBBATTGATYN
NRATCAATVVN		 Misc
Kulakovskiy et al.(2013)
HNF6_HUMAN.H11MO.0.B 		0.879 0.879
Onecut1
M09026_2.00 		Mus musculus
NBBATTGATYN
NRATCAATVVN		 Misc
Kulakovskiy et al.(2013)
HNF6_MOUSE.H11MO.0.A 		0.879 0.879
Onecut1
M09520_2.00 		Mus musculus
NRATCRATMN
NKATYGATYN		 Misc
Heinz et al.(2010)
Liver-Hnf6_ERP000394 		0.879 0.879
ONECUT1
M10418_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF6_Q4 		0.879 0.879
ONECUT1
M10419_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF6_Q6_01 		0.879 0.879
ONECUT1
M04674_2.00 		Homo sapiens
NTATTGATYN
NRATCAATAN		 SELEX
Yin et al.(2017)
ONECUT1_eDBD_Methyl-HT-SELEX 		0.879 0.879
ONECUT1
M04676_2.00 		Homo sapiens
RYSRATCAATAM
KTATTGATYSRY		 SELEX
Yin et al.(2017)
ONECUT1_FL_Methyl-HT-SELEX 		0.879 0.879
onecut
M03716_2.00 		Drosophila melanogaster
NNVRATCRATAHNN
NNDTATYGATYBNN		 SELEX
Nitta et al.(2015)
onecut_1 		0.868 0.868
onecut
M03717_2.00 		Drosophila melanogaster
NNTATYGATTWNN
NNWAATCRATANN		 SELEX
Nitta et al.(2015)
onecut_2 		0.868 0.868
onecut
M06472_2.00 		Drosophila melanogaster
HAATCAA
TTGATTD		 B1H
Mathelier et al.(2014)
MA0235.1 		0.868 0.868
ONECUT2
M02942_2.00 		Homo sapiens
DDTATYGATTTTYN
NRAAAATCRATAHH		 SELEX
Jolma et al.(2013)
ONECUT2_1 		0.857 0.857
ONECUT2
M03714_2.00 		Homo sapiens
NDDTATCGATYBNN
NNVRATCGATAHHN		 SELEX
Nitta et al.(2015)
ONECUT2_1 		0.857 0.857
ONECUT2
M04667_2.00 		Homo sapiens
NNATYGATYN
NRATCRATNN		 SELEX
Yin et al.(2017)
ONECUT2_eDBD_HT-SELEX 		0.857 0.857
ONECUT2
M04669_2.00 		Homo sapiens
NNSGATCGATAH
DTATCGATCSNN		 SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_1 		0.857 0.857
ONECUT2
M04670_2.00 		Homo sapiens
NKATYGATYDN
NHRATCRATMN		 SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_2 		0.857 0.857
ONECUT2
M10417_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OC2_Q3 		0.857 0.857
ONECUT2
M04668_2.00 		Homo sapiens
DTATTGATYN
NRATCAATAH		 SELEX
Yin et al.(2017)
ONECUT2_eDBD_Methyl-HT-SELEX 		0.857 0.857
ONECUT2
M04671_2.00 		Homo sapiens
ACSGATCAATAM
KTATTGATCSGT		 SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_1 		0.857 0.857
ONECUT2
M04672_2.00 		Homo sapiens
DTATTGATTDN
NHAATCAATAH		 SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_2 		0.857 0.857
ONECUT3
M02945_2.00 		Homo sapiens
DWTATYGATTTTYN
NRAAAATCRATAWH		 SELEX
Jolma et al.(2013)
ONECUT3_1 		0.846 0.846
ONECUT3
M04677_2.00 		Homo sapiens
NNATYGATYN
NRATCRATNN		 SELEX
Yin et al.(2017)
ONECUT3_eDBD_HT-SELEX 		0.846 0.846
ONECUT3
M04678_2.00 		Homo sapiens
NTATTGATYN
NRATCAATAN		 SELEX
Yin et al.(2017)
ONECUT3_eDBD_Methyl-HT-SELEX 		0.846 0.846
ceh-48
M01905_2.00 		Caenorhabditis elegans
NNATYGRNN
NNYCRATNN		 PBM
Weirauch et al.(2014)
pTH8982 		0.835 0.835
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PXEA_0000259701-mRNA-1 CUT 1 36
PXEA_0000259701-mRNA-1 Homeodomain 57 111

Links

Other CUT,Homeodomain family TFs
Other Protopolystoma xenopodis TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMU15040257 Schmidtea mediterranea SMU15040257 I 0.945
SMU15004106 Schmidtea mediterranea SMU15004106 I 0.945
LotgiG199735 Lottia gigantea LotgiG199735 I 0.945
EmuJ_001091200 Echinococcus multilocularis EmuJ_001091200 I 0.934
TTAC_0000985401 Hydatigera taeniaeformis TTAC_0000985401 I 0.934
CGI_10019668 Crassostrea gigas CGI_10019668 I 0.934
Sakowv30013296m.g Saccoglossus kowalevskii Sakowv30013296m.g I 0.923
HDID_0000079101 Hymenolepis diminuta HDID_0000079101 I 0.912
HNAJ_0000311601 Hymenolepis nana HNAJ_0000311601 I 0.912
HmN_000304300 Hymenolepis microstoma HmN_000304300 I 0.912
SPU_016449 Strongylocentrotus purpuratus SPU_016449 I 0.901
MCOS_0000716501 Mesocestoides corti MCOS_0000716501 I 0.901
SMAR002755 Strigamia maritima SMAR002755 I 0.890
ENSCSAVG00000000071 Ciona savignyi ENSCSAVG00000000071 I 0.890
SMU15040258 Schmidtea mediterranea SMU15040258 I 0.890
EmuJ_001065200 Echinococcus multilocularis EmuJ_001065200 I 0.890
TsM_000579900 Taenia solium TsM_000579900 I 0.890
ECANG7_03058 Echinococcus canadensis ECANG7_03058 I 0.890
TASK_0000912001 Taenia asiatica TASK_0000912001 I 0.890
GB44974 Apis mellifera GB44974 I 0.879
ACYPI000169 Acyrthosiphon pisum ACYPI000169 I 0.879
TC004129 Tribolium castaneum TC004129 I 0.879
ENSONIG00000002661 Oreochromis niloticus ENSONIG00000002661 I 0.879
onecut1 Oryzias latipes ENSORLG00000012932 I 0.879
ENSPFOG00000016688 Poecilia formosa ENSPFOG00000016688 I 0.879
ONECUT1 Vicugna pacos ENSVPAG00000005723 I 0.879
ENSXMAG00000018128 Xiphophorus maculatus ENSXMAG00000018128 I 0.879
YQE_09159 Dendroctonus ponderosae YQE_09159 I 0.879
NV10665 Nasonia vitripennis NV10665 I 0.879
Hsal_07483--XP_624996.2_APIME Harpegnathos saltator Hsal_07483--XP_624996.2_APIME I 0.879
HmN_000916800 Hymenolepis microstoma HmN_000916800 I 0.879
HNAJ_0001098701 Hymenolepis nana HNAJ_0001098701 I 0.879
ADIR000966 Anopheles dirus ADIR000966 I 0.868
GA15133 Drosophila pseudoobscura FBgn0075158 I 0.868
onecut1 Tetraodon nigroviridis ENSTNIG00000011370 I 0.868
AALB006352 Anopheles albimanus AALB006352 I 0.868
GH24019 Drosophila grimshawi FBgn0131475 I 0.868
onecut2 Takifugu rubripes ENSTRUG00000000677 I 0.868
AATE002650 Anopheles atroparvus AATE002650 I 0.868
GL18146 Drosophila persimilis FBgn0155749 I 0.868
ASIS013617 Anopheles sinensis ASIS013617 I 0.868
ASTEI06198 Anopheles stephensi ASTEI06198 I 0.868
AFUN011577 Anopheles funestus AFUN011577 I 0.868
GK13692 Drosophila willistoni FBgn0215700 I 0.868
AMIN002125 Anopheles minimus AMIN002125 I 0.868
CpipJ_CPIJ006386 Culex pipiens CpipJ_CPIJ006386 I 0.868
GI14052 Drosophila mojavensis FBgn0136806 I 0.868
GJ19930 Drosophila virilis FBgn0207072 I 0.868
ENSAMXG00000015765 Astyanax mexicanus ENSAMXG00000015765 I 0.868
ENSAMXG00000021213 Astyanax mexicanus ENSAMXG00000021213 I 0.868
ENSLOCG00000013415 Lepisosteus oculatus ENSLOCG00000013415 I 0.868
CPIJ006386 Culex quinquefasciatus CPIJ006386 I 0.868
ADAC006269 Anopheles darlingi ADAC006269 I 0.868
ENSONIG00000004792 Oreochromis niloticus ENSONIG00000004792 I 0.857
onecut3a Oryzias latipes ENSORLG00000004983 I 0.857
ENSONIG00000012694 Oreochromis niloticus ENSONIG00000012694 I 0.857
ENSLACG00000016574 Latimeria chalumnae ENSLACG00000016574 I 0.857
onecut3b Danio rerio ENSDARG00000091059 I 0.857
ENSXMAG00000012769 Xiphophorus maculatus ENSXMAG00000012769 I 0.857
onecut3a Danio rerio ENSDARG00000056395 I 0.857
onecut3a Gasterosteus aculeatus ENSGACG00000012671 I 0.857
ONECUT1 Callithrix jacchus ENSCJAG00000000848 I 0.857
onecut3a Takifugu rubripes ENSTRUG00000017862 I 0.857
ENSAMXG00000006507 Astyanax mexicanus ENSAMXG00000006507 I 0.857
ENSPFOG00000018925 Poecilia formosa ENSPFOG00000018925 I 0.857
ENSPFOG00000001415 Poecilia formosa ENSPFOG00000001415 I 0.857
ENSXMAG00000001618 Xiphophorus maculatus ENSXMAG00000001618 I 0.857
TCLT_0000532001 Thelazia callipaeda TCLT_0000532001 I 0.857
CBG05700 Caenorhabditis briggsae CBG05700 I 0.846
ONECUT3 Gallus gallus ENSGALG00000028081 I 0.846
ONECUT3 Homo sapiens ENSG00000205922 D 0.846
Pvit_09823 Pogona vitticeps Pvit_09823 I 0.846
CBN28920 Caenorhabditis brenneri CBN28920 I 0.846
ENSCSAG00000011954 Chlorocebus sabaeus ENSCSAG00000011954 I 0.846
ENSBTAG00000047578 Bos taurus ENSBTAG00000047578 I 0.846
ONECUT3 Gorilla gorilla ENSGGOG00000008983 I 0.846
ENSFALG00000011399 Ficedula albicollis ENSFALG00000011399 I 0.846
onecut3 Xenopus tropicalis XB-GENE-484505 I 0.846
SNAPOd2T00006698001 Oikopleura dioica SNAPOd2T00006698001 I 0.846
HelroG142791 Helobdella robusta HelroG142791 I 0.846
ENSLACG00000017269 Latimeria chalumnae ENSLACG00000017269 I 0.846
ONECUT3 Otolemur garnettii ENSOGAG00000030667 I 0.846
Onecut3 Mus musculus ENSMUSG00000045518 I 0.846
ONECUT3 Sus scrofa ENSSSCG00000013439 I 0.846
ENSSTOG00000027380 Ictidomys tridecemlineatus ENSSTOG00000027380 I 0.846
GPLIN_001402700 Globodera pallida GPLIN_001402700 I 0.835
CRE24704 Caenorhabditis remanei CRE24704 I 0.835
CRE22230 Caenorhabditis remanei CRE22230 I 0.835
onecut3b Gasterosteus aculeatus ENSGACG00000015272 I 0.835
ONECUT3 Taeniopygia guttata ENSTGUG00000000213 I 0.835
ceh-48 Caenorhabditis elegans WBGene00015934 D 0.835
ENSGMOG00000012200 Gadus morhua ENSGMOG00000012200 I 0.835
onecut3b Takifugu rubripes ENSTRUG00000008911 I 0.824
CJA05277 Caenorhabditis japonica CJA05277 I 0.824
ENSLACG00000011596 Latimeria chalumnae ENSLACG00000011596 I 0.824
ENSPSIG00000009063 Pelodiscus sinensis ENSPSIG00000009063 I 0.813
Cmyd_10007600 Chelonia mydas Cmyd_10007600 I 0.813
onecut3b Tetraodon nigroviridis ENSTNIG00000015320 I 0.813
PHUM228480 Pediculus humanus PHUM228480 I 0.802
onecutl Tetraodon nigroviridis ENSTNIG00000019595 I 0.769
onecutl Takifugu rubripes ENSTRUG00000000664 I 0.769
ENSPFOG00000007991 Poecilia formosa ENSPFOG00000007991 I 0.758
onecutl Gasterosteus aculeatus ENSGACG00000013501 I 0.758
onecutl Oryzias latipes ENSORLG00000015739 I 0.758
ENSLOCG00000007915 Lepisosteus oculatus ENSLOCG00000007915 I 0.758
ONECUT2 Tursiops truncatus ENSTTRG00000012956 I 0.758
ENSXMAG00000008993 Xiphophorus maculatus ENSXMAG00000008993 I 0.758
L889_g27415 Steinernema feltiae L889_g27415 I 0.747
L898_g12845 Steinernema monticolum L898_g12845 I 0.747
SMUV_0000999101 Syphacia muris SMUV_0000999101 I 0.747
L893_g20975 Steinernema glaseri L893_g20975 I 0.747
ENSGMOG00000005103 Gadus morhua ENSGMOG00000005103 I 0.747
L596_g1964 Steinernema carpocapsae L596_g1964 I 0.747
TRE_0001030801 Trichobilharzia regenti TRE_0001030801 I 0.740
nDi.2.2.2.g00186 Dirofilaria immitis nDi.2.2.2.g00186 I 0.736
nAv.1.0.1.g09678 Acanthocheilonema viteae nAv.1.0.1.g09678 I 0.736
MhA1_Contig20.frz3.gene53 Meloidogyne hapla MhA1_Contig20.frz3.gene53 I 0.736
scaffold421-EXSNAP2012.16 Pristionchus exspectatus scaffold421-EXSNAP2012.16 I 0.736
TCLT_0000779601 Thelazia callipaeda TCLT_0000779601 I 0.736
Bm3512 Brugia malayi Bm3512 I 0.736
ceh-38 Caenorhabditis elegans WBGene00000459 I 0.736
CBG11192 Caenorhabditis briggsae CBG11192 I 0.736
nLs.2.1.2.g01435 Litomosoides sigmodontis nLs.2.1.2.g01435 I 0.736
nOo.2.0.1.g10331 Onchocerca ochengi nOo.2.0.1.g10331 I 0.736
NECAME_06517 Necator americanus NECAME_06517 N 0.736
CBN23227 Caenorhabditis brenneri CBN23227 I 0.736
EEL_0000016301 Elaeophora elaphi EEL_0000016301 I 0.736
DME_0000092301 Dracunculus medinensis DME_0000092301 I 0.736
DICVIV_06959 Dictyocaulus viviparus DICVIV_06959 I 0.736
BTMF_0001011301 Brugia timori BTMF_0001011301 I 0.736
ANCDUO_06286 Ancylostoma duodenale ANCDUO_06286 I 0.736
GPLIN_001052100 Globodera pallida GPLIN_001052100 I 0.736
WBGene00247461 Onchocerca volvulus WBGene00247461 I 0.736
HelroG134261 Helobdella robusta HelroG134261 N 0.736
LOAG_08712 Loa loa LOAG_08712 I 0.736
HCOI01220000 Haemonchus contortus HCOI01220000 I 0.736
ASU_11536 Ascaris suum ASU_11536 I 0.729
HelroG151232 Helobdella robusta HelroG151232 I 0.725
BXY_1717400 Bursaphelenchus xylophilus BXY_1717400 I 0.714
ECPE_0001445601 Echinostoma caproni ECPE_0001445601 I 0.703