CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000063601
(
Syphacia muris
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
SMUV_0000063601
T167616_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000063601-mRNA-1
CUT
582
659
MRPLNTAELARQCKRLMIACNIGQRLFAKFVMNQSQGSLSELLSKPRHWNKLTDKGREAFRRIYGWVSDERAVSLLCA
SMUV_0000063601-mRNA-1
CUT
850
925
RYPVLDTDDIVRRVREYLCAHSISQRQFGEHVLGLSQGSVSDLLARPKPWLLLTQKGREPFIRMQIFLSEAGLSAE
SMUV_0000063601-mRNA-1
CUT
1004
1081
SIEKLDAASVIQLVKKRLQTYGCSQKIFGDLVLGMEANDVSKLFRINSSCDLTIDEREAVNKMKKWLEISETVRISQN
SMUV_0000063601-mRNA-1
Homeodomain
1129
1185
KSQRTVITEQQKEALKLVFASDHHPSQRTIEQLSEKLSLNPRTVNNWFHNYRTRQKD
Links
Other
CUT,Homeodomain
family TFs
Other
Syphacia muris
TFs
0 Related TFs
">No related TF found