CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000999101
(
Syphacia muris
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
SMUV_0000999101
T167617_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
onecut
M03716_2.00
Drosophila melanogaster
NNVRATCRATAHNN
NNDTATYGATYBNN
SELEX
Nitta et al.(2015)
onecut_1
0.721
0.721
onecut
M03717_2.00
Drosophila melanogaster
NNTATYGATTWNN
NNWAATCRATANN
SELEX
Nitta et al.(2015)
onecut_2
0.721
0.721
onecut
M06472_2.00
Drosophila melanogaster
HAATCAA
TTGATTD
B1H
Mathelier et al.(2014)
MA0235.1
0.721
0.721
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000999101-mRNA-1
CUT
134
212
DDIYIDTKDLCKRIAWELKQHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKLKSGRETFRRMFNWVQLPLSQRLGILE
SMUV_0000999101-mRNA-1
Homeodomain
290
346
KRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLSTVANFFMNARRRSRS
Links
Other
CUT,Homeodomain
family TFs
Other
Syphacia muris
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EVEC_0000332701
Enterobius vermicularis
EVEC_0000332701
I
0.993
ASU_08868
Ascaris suum
ASU_08868
I
0.977
nLs.2.1.2.g01435
Litomosoides sigmodontis
nLs.2.1.2.g01435
I
0.956
nOo.2.0.1.g10331
Onchocerca ochengi
nOo.2.0.1.g10331
I
0.956
scaffold421-EXSNAP2012.16
Pristionchus exspectatus
scaffold421-EXSNAP2012.16
I
0.956
nDi.2.2.2.g00186
Dirofilaria immitis
nDi.2.2.2.g00186
I
0.956
nAv.1.0.1.g09678
Acanthocheilonema viteae
nAv.1.0.1.g09678
I
0.956
DME_0000092301
Dracunculus medinensis
DME_0000092301
I
0.956
BTMF_0001011301
Brugia timori
BTMF_0001011301
I
0.956
LOAG_08712
Loa loa
LOAG_08712
I
0.956
EEL_0000016301
Elaeophora elaphi
EEL_0000016301
I
0.956
WBGene00247461
Onchocerca volvulus
WBGene00247461
I
0.956
TCLT_0000779601
Thelazia callipaeda
TCLT_0000779601
I
0.956
Bm3512
Brugia malayi
Bm3512
I
0.956
DICVIV_06959
Dictyocaulus viviparus
DICVIV_06959
I
0.949
L898_g12845
Steinernema monticolum
L898_g12845
I
0.949
ANCDUO_06286
Ancylostoma duodenale
ANCDUO_06286
I
0.949
L889_g27415
Steinernema feltiae
L889_g27415
I
0.949
HCOI01220000
Haemonchus contortus
HCOI01220000
I
0.949
L893_g20975
Steinernema glaseri
L893_g20975
I
0.949
L596_g1964
Steinernema carpocapsae
L596_g1964
I
0.941
WUBG_00613
Wuchereria bancrofti
WUBG_00613
N
0.941
NECAME_06517
Necator americanus
NECAME_06517
N
0.934
CBN23227
Caenorhabditis brenneri
CBN23227
I
0.926
ceh-38
Caenorhabditis elegans
WBGene00000459
I
0.926
CJA03729
Caenorhabditis japonica
CJA03729
I
0.926
CRE26474
Caenorhabditis remanei
CRE26474
I
0.919
CBG11192
Caenorhabditis briggsae
CBG11192
I
0.919
GPLIN_001052100
Globodera pallida
GPLIN_001052100
I
0.904
Minc16757
Meloidogyne incognita
Minc16757
I
0.890
MhA1_Contig512.frz3.fgene1
Meloidogyne hapla
MhA1_Contig512.frz3.fgene1
I
0.890
BXY_1717400
Bursaphelenchus xylophilus
BXY_1717400
I
0.875
RSKR_0000794200
Rhabditophanes kr3021
RSKR_0000794200
N
0.853
ANCCEY_12232
Ancylostoma ceylanicum
ANCCEY_12232
N
0.831
L892_g29126
Steinernema scapterisci
L892_g29126
N
0.824
nRc.2.0.1.g02844
Romanomermis culicivorax
nRc.2.0.1.g02844
N
0.785
PXEA_0000259701
Protopolystoma xenopodis
PXEA_0000259701
I
0.747
TMUE_s0014009100
Trichuris muris
TMUE_s0014009100
I
0.746
TTRE_0000086601
Trichuris trichiura
TTRE_0000086601
I
0.746
ASU_11536
Ascaris suum
ASU_11536
I
0.738
ONECUT1
Erinaceus europaeus
ENSEEUG00000010121
I
0.733
ASIM_0001287801
Anisakis simplex
ASIM_0001287801
I
0.733
GE14509
Drosophila yakuba
FBgn0232113
I
0.733
LOAG_18692
Loa loa
LOAG_18692
I
0.733
D915_15034
Fasciola hepatica
D915_15034
I
0.731
CapteG52697
Capitella teleta
CapteG52697
I
0.731
A_00240
Schistosoma haematobium
A_00240
I
0.731
Sjc_0006770
Schistosoma japonicum
Sjc_0006770
I
0.731
Smp_196950
Schistosoma mansoni
Smp_196950
I
0.731
SMTD_0000015201
Schistosoma mattheei
SMTD_0000015201
I
0.731
SROB_0000769301
Schistosoma rodhaini
SROB_0000769301
I
0.731
SMRZ_0000163501
Schistosoma margrebowiei
SMRZ_0000163501
I
0.731
Smp_013070
Schistosoma mansoni
Smp_013070
I
0.731
SCUD_0001643701
Schistosoma curassoni
SCUD_0001643701
I
0.731
TCLT_0000532001
Thelazia callipaeda
TCLT_0000532001
I
0.728
DAPPUDRAFT_32500
Daphnia pulex
DAPPUDRAFT_32500
I
0.727
L893_g27707
Steinernema glaseri
L893_g27707
I
0.726
L889_g23716
Steinernema feltiae
L889_g23716
I
0.726
onecut
Drosophila melanogaster
FBgn0028996
D
0.726
L596_g14922
Steinernema carpocapsae
L596_g14922
I
0.726
L898_g28854
Steinernema monticolum
L898_g28854
I
0.726
GG16442
Drosophila erecta
FBgn0108673
I
0.726
GM26776
Drosophila sechellia
FBgn0181629
I
0.726
csin111721
Clonorchis sinensis
csin111721
I
0.724
T265_00751
Opisthorchis viverrini
T265_00751
I
0.724
csin107314
Clonorchis sinensis
csin107314
I
0.724
T265_01147
Opisthorchis viverrini
T265_01147
I
0.724
LotgiG199735
Lottia gigantea
LotgiG199735
I
0.724
GH24019
Drosophila grimshawi
FBgn0131475
I
0.721
GA15133
Drosophila pseudoobscura
FBgn0075158
I
0.721
GI14052
Drosophila mojavensis
FBgn0136806
I
0.721
GL18146
Drosophila persimilis
FBgn0155749
I
0.721
GJ19930
Drosophila virilis
FBgn0207072
I
0.721
GK13692
Drosophila willistoni
FBgn0215700
I
0.721
HCOI01108700
Haemonchus contortus
HCOI01108700
I
0.719
HCOI00211900
Haemonchus contortus
HCOI00211900
I
0.719
AAEL002359
Aedes aegypti
AAEL002359
I
0.719
CPIJ006386
Culex quinquefasciatus
CPIJ006386
I
0.719
DICVIV_04514
Dictyocaulus viviparus
DICVIV_04514
I
0.719
PPAI010631
Phlebotomus papatasi
PPAI010631
I
0.719
AARA001117
Anopheles arabiensis
AARA001117
I
0.719
HMEL003746
Heliconius melpomene
HMEL003746
I
0.719
KGM_19875
Danaus plexippus
KGM_19875
I
0.719
ACHR009241
Anopheles christyi
ACHR009241
I
0.719
AEPI005805
Anopheles epiroticus
AEPI005805
I
0.719
AGAP000061
Anopheles gambiae
AGAP000061
I
0.719
AMEM014370
Anopheles merus
AMEM014370
I
0.719
AMEC018792
Anopheles melas
AMEC018792
I
0.719
CpipJ_CPIJ006386
Culex pipiens
CpipJ_CPIJ006386
I
0.719
TsM_001008400
Taenia solium
TsM_001008400
I
0.716
TASK_0000698901
Taenia asiatica
TASK_0000698901
I
0.716
onecut1.2
Xenopus tropicalis
XB-GENE-1021674
I
0.716
ECANG7_03124
Echinococcus canadensis
ECANG7_03124
I
0.716
AFUN011577
Anopheles funestus
AFUN011577
I
0.713
YQE_09159
Dendroctonus ponderosae
YQE_09159
I
0.713
CRE24704
Caenorhabditis remanei
CRE24704
I
0.713
ACYPI000169
Acyrthosiphon pisum
ACYPI000169
I
0.713
CBG05700
Caenorhabditis briggsae
CBG05700
I
0.713
TC004129
Tribolium castaneum
TC004129
I
0.713
CRE22230
Caenorhabditis remanei
CRE22230
I
0.713
SMAR002755
Strigamia maritima
SMAR002755
I
0.713
SMU15040257
Schmidtea mediterranea
SMU15040257
I
0.713
ADAC006269
Anopheles darlingi
ADAC006269
I
0.713
AMIN002125
Anopheles minimus
AMIN002125
I
0.713
ASIS013617
Anopheles sinensis
ASIS013617
I
0.713
ASTEI06198
Anopheles stephensi
ASTEI06198
I
0.713
AATE002650
Anopheles atroparvus
AATE002650
I
0.713
ADIR000966
Anopheles dirus
ADIR000966
I
0.713
AALB006352
Anopheles albimanus
AALB006352
I
0.713
PHUM432770
Pediculus humanus
PHUM432770
I
0.711
LLOJ005577
Lutzomyia longipalpis
LLOJ005577
I
0.711
MCOS_0000716501
Mesocestoides corti
MCOS_0000716501
I
0.709
Alligator_sinensis_CCG019829.1
Alligator sinensis
Alligator_sinensis_CCG019829.1
I
0.709
TTAC_0000985401
Hydatigera taeniaeformis
TTAC_0000985401
I
0.706
CJA05277
Caenorhabditis japonica
CJA05277
I
0.706
CGI_10019668
Crassostrea gigas
CGI_10019668
I
0.706
TRE_0001030801
Trichobilharzia regenti
TRE_0001030801
I
0.706
RSKR_0000243000
Rhabditophanes kr3021
RSKR_0000243000
N
0.706
SMU15004106
Schmidtea mediterranea
SMU15004106
I
0.706
Hsal_07483--XP_624996.2_APIME
Harpegnathos saltator
Hsal_07483--XP_624996.2_APIME
I
0.706
tetur31g00520
Tetranychus urticae
tetur31g00520
I
0.706
GB44974
Apis mellifera
GB44974
I
0.706
NV10665
Nasonia vitripennis
NV10665
I
0.706
CBN28920
Caenorhabditis brenneri
CBN28920
I
0.704
ENSACAG00000027024
Anolis carolinensis
ENSACAG00000027024
I
0.701
Ogr13048
Ophisaurus gracilis
Ogr13048
I
0.701
Pvit_04983
Pogona vitticeps
Pvit_04983
I
0.701