SMUV_0000999101 (Syphacia muris)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
SMUV_0000999101 T167617_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
onecut
M03716_2.00
Drosophila melanogaster
NNVRATCRATAHNN

NNDTATYGATYBNN
SELEX
Nitta et al.(2015)
onecut_1
0.721 0.721
onecut
M03717_2.00
Drosophila melanogaster
NNTATYGATTWNN

NNWAATCRATANN
SELEX
Nitta et al.(2015)
onecut_2
0.721 0.721
onecut
M06472_2.00
Drosophila melanogaster
HAATCAA

TTGATTD
B1H
Mathelier et al.(2014)
MA0235.1
0.721 0.721
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000999101-mRNA-1 CUT 134 212
SMUV_0000999101-mRNA-1 Homeodomain 290 346

Links

Other CUT,Homeodomain family TFs
Other Syphacia muris TFs

Invalid Input OrderBy

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action