TASK_0000698901 (Taenia asiatica)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
TASK_0000698901 T167631_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
onecut
M03716_2.00
Drosophila melanogaster
NNVRATCRATAHNN

NNDTATYGATYBNN
SELEX
Nitta et al.(2015)
onecut_1
0.896 0.896
onecut
M03717_2.00
Drosophila melanogaster
NNTATYGATTWNN

NNWAATCRATANN
SELEX
Nitta et al.(2015)
onecut_2
0.896 0.896
onecut
M06472_2.00
Drosophila melanogaster
HAATCAA

TTGATTD
B1H
Mathelier et al.(2014)
MA0235.1
0.896 0.896
ONECUT1
M02943_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_1
0.873 0.873
ONECUT1
M02944_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_2
0.873 0.873
ONECUT1
M03715_2.00
Homo sapiens
HRATCGATAHH

DDTATCGATYD
SELEX
Nitta et al.(2015)
ONECUT1_1
0.873 0.873
ONECUT1
M04673_2.00
Homo sapiens
NNATCGATYN

NRATCGATNN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_HT-SELEX
0.873 0.873
ONECUT1
M04675_2.00
Homo sapiens
NNCGATCGATAN

NTATCGATCGNN
SELEX
Yin et al.(2017)
ONECUT1_FL_HT-SELEX
0.873 0.873
ONECUT1
M09022_2.00
Homo sapiens
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_HUMAN.H11MO.0.B
0.873 0.873
Onecut1
M09026_2.00
Mus musculus
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_MOUSE.H11MO.0.A
0.873 0.873
Onecut1
M09520_2.00
Mus musculus
NRATCRATMN

NKATYGATYN
Misc
Heinz et al.(2010)
Liver-Hnf6_ERP000394
0.873 0.873
ONECUT1
M10418_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q4
0.873 0.873
ONECUT1
M10419_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q6_01
0.873 0.873
ONECUT1
M04674_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_Methyl-HT-SELEX
0.873 0.873
ONECUT1
M04676_2.00
Homo sapiens
RYSRATCAATAM

KTATTGATYSRY
SELEX
Yin et al.(2017)
ONECUT1_FL_Methyl-HT-SELEX
0.873 0.873
ONECUT2
M02942_2.00
Homo sapiens
DDTATYGATTTTYN

NRAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT2_1
0.866 0.866
ONECUT2
M03714_2.00
Homo sapiens
NDDTATCGATYBNN

NNVRATCGATAHHN
SELEX
Nitta et al.(2015)
ONECUT2_1
0.866 0.866
ONECUT2
M04667_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT2_eDBD_HT-SELEX
0.866 0.866
ONECUT2
M04669_2.00
Homo sapiens
NNSGATCGATAH

DTATCGATCSNN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_1
0.866 0.866
ONECUT2
M04670_2.00
Homo sapiens
NKATYGATYDN

NHRATCRATMN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_2
0.866 0.866
ONECUT2
M10417_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OC2_Q3
0.866 0.866
ONECUT2
M04668_2.00
Homo sapiens
DTATTGATYN

NRATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_eDBD_Methyl-HT-SELEX
0.866 0.866
ONECUT2
M04671_2.00
Homo sapiens
ACSGATCAATAM

KTATTGATCSGT
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_1
0.866 0.866
ONECUT2
M04672_2.00
Homo sapiens
DTATTGATTDN

NHAATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_2
0.866 0.866
ONECUT3
M02945_2.00
Homo sapiens
DWTATYGATTTTYN

NRAAAATCRATAWH
SELEX
Jolma et al.(2013)
ONECUT3_1
0.851 0.851
ONECUT3
M04677_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_HT-SELEX
0.851 0.851
ONECUT3
M04678_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_Methyl-HT-SELEX
0.851 0.851
ceh-48
M01905_2.00
Caenorhabditis elegans
NNATYGRNN

NNYCRATNN
PBM
Weirauch et al.(2014)
pTH8982
0.828 0.828
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TASK_0000698901-mRNA-1 CUT 409 487
TASK_0000698901-mRNA-1 Homeodomain 518 572

Links

Other CUT,Homeodomain family TFs
Other Taenia asiatica TFs

308 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29728.m000821 Ricinus communis 29728.m000821 N 0.000
Aquca_023_00033 Aquilegia coerulea Aquca_023_00033 N 0.000
BGIOSGA009486 Oryza indica BGIOSGA009486 N 0.000
cassava25358.m1 Manihot esculenta cassava25358.m1 N 0.000
Ca_04306 Cicer arietinum Ca_04306 N 0.000
chr5.LjT08L18.190.nd Lotus japonicus chr5.LjT08L18.190.nd N 0.000
Ciclev10002467m.g Citrus clementina Ciclev10002467m.g N 0.000
Cla012103 Citrullus lanatus Cla012103 N 0.000
Cucsa.088330 Cucumis sativus Cucsa.088330 N 0.000
gene29104-v1.0-hybrid Fragaria vesca gene29104-v1.0-hybrid N 0.000
GLYMA20G31580 Glycine max GLYMA20G31580 N 0.000
Gorai.005G074700 Gossypium raimondii Gorai.005G074700 N 0.000
mgf002286m Mimulus guttatus mgf002286m N 0.000
MTR_1g096340 Medicago truncatula MTR_1g096340 N 0.000
OBART03G40280 Oryza barthii OBART03G40280 N 0.000
OGLUM03G40150 Oryza glumaepatula OGLUM03G40150 N 0.000
OLONG_012145 Oryza longistaminata OLONG_012145 N 0.000
ONIVA03G42160 Oryza nivara ONIVA03G42160 N 0.000
OPUNC03G37470 Oryza punctata OPUNC03G37470 N 0.000
OPUNC03G37490 Oryza punctata OPUNC03G37490 N 0.000
orange1.1g028218m.g Citrus sinensis orange1.1g028218m.g N 0.000
ORGLA03G0371400 Oryza glaberrima ORGLA03G0371400 N 0.000
ORUFI03G42080 Oryza rufipogon ORUFI03G42080 N 0.000
OS03G0838900 Oryza sativa OS03G0838900 N 0.000
PGSC0003DMG400009226 Solanum tuberosum PGSC0003DMG400009226 N 0.000
Pm022190 Prunus mume Pm022190 N 0.000
POPTR_0013s11780 Populus trichocarpa POPTR_0013s11780 N 0.000
PRUPE_ppa026991mg Prunus persica PRUPE_ppa026991mg N 0.000
SapurV1A.0179s0060 Salix purpurea SapurV1A.0179s0060 N 0.000
Solyc11g017430.1 Solanum lycopersicum Solyc11g017430.1 N 0.000
TCM_036345 Theobroma cacao TCM_036345 N 0.000
VIT_18s0072g01130 Vitis vinifera VIT_18s0072g01130 N 0.000