CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10018072
(
Chelonia mydas
)
CUT,Homeodomain,MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
PF10545 (MADF_DNA_bdg)
IPR003350
IPR001356
IPR006578
Cmyd_10018072
T167644_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10018072
MADF
143
225
VRDLIAVWGDESVLAELRSKRRIAKIFEKVSSGMKDRGYNRDPQQCRVKIKELRQAYQKSREANGRSGSEPQTCRFYDELHAI
Cmyd_10018072
CUT
711
790
NSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPDTERDRIYQ
Cmyd_10018072
CUT
835
913
ANVNITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYE
Cmyd_10018072
Homeodomain
969
1026
PRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKH
Links
Other
CUT,Homeodomain,MADF
family TFs
Other
Chelonia mydas
TFs
0 Related TFs
">No related TF found