CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MBD1
(
Loxodonta africana
)
CxxC,MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
PF01429 (MBD)
IPR002857
IPR001739
ENSLAFG00000031328
T167670_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000027183
MBD
1
90
MAEDWLDCPALGPGWKRREVLRKSGVTCGRSDTYYESPTGDRIRSKVELTRYLGPACDLTLFDFKHGVLCYPAPKAHVLAVPSRKRKKPS
ENSLAFP00000027183
CxxC
175
220
CWQRVGCGECTACQVTEDCGACSTCLLQLPHDVASGLFCKCEQRRC
ENSLAFP00000027183
CxxC
222
267
RIVERSRGCGVCRGCQTREDCGCCRVCLRPPRPGLRRQWRCVQRRC
ENSLAFP00000027183
CxxC
335
382
TNRRQNRKCGSCAACLRRTDCGRCDFCCDKPKFGGSNQKRQKCRWRQC
ENSLAFP00000027543
MBD
1
91
MAEDWLDCPALGPGWKRREVLRKSGVTCGRSDTYYESPTGDRIRSKVELTRYLGPACDLTLFDFKHGVLCYPAPKAHVLAVPSRKRKKPSR
ENSLAFP00000027543
CxxC
175
220
CWQRVGCGECTACQVTEDCGACSTCLLQLPHDVASGLFCKCEQRRC
Links
Other
CxxC,MBD
family TFs
Other
Loxodonta africana
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MBD1
Procavia capensis
ENSPCAG00000001648
N
0.944
ENSOARG00000004218
Ovis aries
ENSOARG00000004218
N
0.938
MBD1
Sus scrofa
ENSSSCG00000004516
N
0.929
ENSMPUG00000008843
Mustela putorius furo
ENSMPUG00000008843
N
0.929
MBD1
Equus caballus
ENSECAG00000011497
N
0.929
ENSAMEG00000000238
Ailuropoda melanoleuca
ENSAMEG00000000238
N
0.925
MBD1
Felis catus
ENSFCAG00000015730
N
0.925
MBD1
Bos taurus
ENSBTAG00000003801
N
0.925
ENSSTOG00000007780
Ictidomys tridecemlineatus
ENSSTOG00000007780
N
0.925
MBD1
Dasypus novemcinctus
ENSDNOG00000015998
N
0.924
MBD1
Tursiops truncatus
ENSTTRG00000015523
N
0.920
MBD1
Canis familiaris
ENSCAFG00000018928
N
0.915
MBD1
Callithrix jacchus
ENSCJAG00000004959
N
0.915
ENSMMUP00000011865
Macaca fascicularis
ENSMMUP00000011865
N
0.911
ENSPANG00000010867
Papio anubis
ENSPANG00000010867
N
0.911
MBD1
Pan troglodytes
ENSPTRG00000010021
N
0.911
ENSPPYG00000009158
Pongo abelii
ENSPPYG00000009158
N
0.911
ENSNLEG00000011661
Nomascus leucogenys
ENSNLEG00000011661
N
0.911
MBD1
Homo sapiens
ENSG00000141644
N
0.911
ENSCSAG00000018070
Chlorocebus sabaeus
ENSCSAG00000018070
N
0.911
MBD1
Cavia porcellus
ENSCPOG00000001671
N
0.911
MBD1
Gorilla gorilla
ENSGGOG00000016966
N
0.911
MBD1
Macaca mulatta
ENSMMUG00000009050
N
0.911
MBD1
Otolemur garnettii
ENSOGAG00000003784
N
0.906
ENSBTAP00000004954-D1
Bos grunniens
ENSBTAP00000004954-D1
N
0.897
MBD1
Ochotona princeps
ENSOPRG00000007647
N
0.897
Myotis_brandtii_MBD1_10005913
Myotis brandtii
Myotis_brandtii_MBD1_10005913
N
0.892
MBD1
Myotis lucifugus
ENSMLUG00000008286
N
0.892
MBD1
Oryctolagus cuniculus
ENSOCUG00000006554
N
0.887
Mbd1
Dipodomys ordii
ENSDORG00000013917
N
0.854
Mbd1
Rattus norvegicus
ENSRNOG00000024104
N
0.783
ENSTSYG00000000509
Tarsius syrichta
ENSTSYG00000000509
N
0.706