CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MBD1
(
Sus scrofa
)
CxxC,MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
PF01429 (MBD)
IPR002857
IPR001739
ENSSSCG00000004516
T167693_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000004871
MBD
27
115
MAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLSLFDFKQGILCYPAPKAHSLAVPSRKRKKP
ENSSSCP00000004871
CxxC
194
241
QRMFKRVGCGECTACQVTEDCGACSTCLLQLPHDVASGLFCKCEQRRC
ENSSSCP00000004871
CxxC
243
288
RIVERSRGCGVCRGCQTREDCGRCRVCLRPPRPGLRRQWKCVQRRC
ENSSSCP00000004871
CxxC
381
428
TNRRQNRKCGACTACLRRMDCGHCDFCCDKPKFGGSNQKRQKCRWRQC
Links
Other
CxxC,MBD
family TFs
Other
Sus scrofa
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000238
Ailuropoda melanoleuca
ENSAMEG00000000238
N
0.977
ENSOARG00000004218
Ovis aries
ENSOARG00000004218
N
0.972
MBD1
Tursiops truncatus
ENSTTRG00000015523
N
0.972
MBD1
Bos taurus
ENSBTAG00000003801
N
0.972
MBD1
Felis catus
ENSFCAG00000015730
N
0.967
ENSMPUG00000008843
Mustela putorius furo
ENSMPUG00000008843
N
0.967
MBD1
Cavia porcellus
ENSCPOG00000001671
N
0.967
MBD1
Callithrix jacchus
ENSCJAG00000004959
N
0.967
MBD1
Dasypus novemcinctus
ENSDNOG00000015998
N
0.962
MBD1
Canis familiaris
ENSCAFG00000018928
N
0.962
MBD1
Equus caballus
ENSECAG00000011497
N
0.962
ENSPANG00000010867
Papio anubis
ENSPANG00000010867
N
0.962
ENSPPYG00000009158
Pongo abelii
ENSPPYG00000009158
N
0.962
ENSNLEG00000011661
Nomascus leucogenys
ENSNLEG00000011661
N
0.962
ENSMMUP00000011865
Macaca fascicularis
ENSMMUP00000011865
N
0.962
ENSCSAG00000018070
Chlorocebus sabaeus
ENSCSAG00000018070
N
0.962
MBD1
Macaca mulatta
ENSMMUG00000009050
N
0.962
MBD1
Gorilla gorilla
ENSGGOG00000016966
N
0.958
MBD1
Pan troglodytes
ENSPTRG00000010021
N
0.958
MBD1
Homo sapiens
ENSG00000141644
N
0.958
MBD1
Otolemur garnettii
ENSOGAG00000003784
N
0.953
ENSSTOG00000007780
Ictidomys tridecemlineatus
ENSSTOG00000007780
N
0.948
MBD1
Myotis lucifugus
ENSMLUG00000008286
N
0.944
ENSBTAP00000004954-D1
Bos grunniens
ENSBTAP00000004954-D1
N
0.944
MBD1
Procavia capensis
ENSPCAG00000001648
N
0.944
Myotis_brandtii_MBD1_10005913
Myotis brandtii
Myotis_brandtii_MBD1_10005913
N
0.944
MBD1
Ochotona princeps
ENSOPRG00000007647
N
0.930
MBD1
Loxodonta africana
ENSLAFG00000031328
N
0.929
MBD1
Oryctolagus cuniculus
ENSOCUG00000006554
N
0.915
Mbd1
Dipodomys ordii
ENSDORG00000013917
N
0.883
ENSTSYG00000000509
Tarsius syrichta
ENSTSYG00000000509
N
0.742
MBD1
Ornithorhynchus anatinus
ENSOANG00000014593
N
0.722