cxxc1b (Danio rerio)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02008 (zf-CXXC) IPR002857 ENSDARG00000025718 T167912_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA binding activity and zinc ion binding activity. Acts upstream of or within DNA methylation on cytosine; blood vessel development; and hemopoiesis. Predicted to be located in nucleus. Predicted to be part of Set1C/COMPASS complex. Is expressed in retinal cone cell and retinal photoreceptor layer. Orthologous to human CXXC1 (CXXC finger protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BAD93120.1_CONSTRUCT
M01919_2.00 		PBM CONSTRUCTS
NNNBCGN
NCGVNNN		 PBM
Weirauch et al.(2014)
pTH7032 		0.875 0.875
CXXC1
M10428_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CGBP_01 		0.875 0.875
CXXC1
M10429_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CGBP_02 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000032784 CxxC 114 162

Links

Other CxxC family TFs
Other Danio rerio TFs

Invalid Input OrderBy

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action