CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FQ377654.1
(
Danio rerio
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSDARG00000098299
T167924_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_006525770.1
M01918_2.00
Mus musculus
CGCGCGWT
AWCGCGCG
PBM
Weirauch et al.(2014)
pTH7030
0.707
0.707
BAD93120.1_CONSTRUCT
M01919_2.00
PBM CONSTRUCTS
NNNBCGN
NCGVNNN
PBM
Weirauch et al.(2014)
pTH7032
0.707
0.707
CXXC1
M10428_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CGBP_01
0.707
0.707
CXXC1
M10429_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CGBP_02
0.707
0.707
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000140536
CxxC
1
41
MCQRCDACRRDTDCGKCDFCMDKPKFGGSNKKRQKCRLRQC
Links
Other
CxxC
family TFs
Other
Danio rerio
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy