kdm2ba (Takifugu rubripes)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02008 (zf-CXXC) IPR002857 ENSTRUG00000005276 T168366_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN

NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
1.000 1.000
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN

NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.957 0.957
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN

NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.947 0.947
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN

NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.851 0.851
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA

TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.842 0.842
BGIBMGA012843
M01907_2.00
Bombyx mori
NNCGCGTANVNN

NNBNTACGCGNN
PBM
Weirauch et al.(2014)
pTH9239
0.789 0.789
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN

NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000012658 CxxC 46 92
ENSTRUP00000012659 CxxC 46 92
ENSTRUP00000012660 CxxC 1 19

Links

Other CxxC family TFs
Other Takifugu rubripes TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.000
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.000
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.000
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.000
ASIL2 Arabidopsis thaliana AT3G14180 D 0.000
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.000
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.000
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.000
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.000
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.000
Bo6g075950 Brassica oleracea Bo6g075950 I 0.000
Bra003346 Brassica rapa Bra003346 I 0.000
Bra007407 Brassica rapa Bra007407 I 0.000
PK27986.1 Cannabis sativa PK27986.1 I 0.000
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.000
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.000
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.000
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.000
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.000
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.000
Ca_02494 Cicer arietinum Ca_02494 N 0.000
Ca_00394 Cicer arietinum Ca_00394 I 0.000
Ca_19877 Cicer arietinum Ca_19877 I 0.000
Cla019967 Citrullus lanatus Cla019967 I 0.000
Cla009854 Citrullus lanatus Cla009854 I 0.000
Cla002288 Citrullus lanatus Cla002288 I 0.000
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.000
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.000
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.000
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.000
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.000
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.000
Cucsa.195790 Cucumis sativus Cucsa.195790 N 0.000
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.000
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.000
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.000
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.000
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.000
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.000
GLYMA13G36650 Glycine max GLYMA13G36650 I 0.000
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.000
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.000
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.000
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.000
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.000
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.000
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.000
MDP0000301451 Malus domestica MDP0000301451 I 0.000
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.000
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.000
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.000
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.000
mgf000047m Mimulus guttatus mgf000047m I 0.000
mgf001239m Mimulus guttatus mgf001239m N 0.000
mgf006505m Mimulus guttatus mgf006505m I 0.000
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.000
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.000
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.000
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.000
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.000
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.000
OBART05G25610 Oryza barthii OBART05G25610 I 0.000
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.000
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.000
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.000
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.000
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.000
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.000
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.000
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.000
OS05G0560600 Oryza sativa OS05G0560600 I 0.000
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.000
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.000
POPTR_0003s11850 Populus trichocarpa POPTR_0003s11850 I 0.000
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.000
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.000
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.000
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.000
29900.m001628 Ricinus communis 29900.m001628 I 0.000
29814.m000741 Ricinus communis 29814.m000741 I 0.000
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.000
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.000
SELMODRAFT_68039 Selaginella moellendorffii SELMODRAFT_68039 I 0.000
SELMODRAFT_68041 Selaginella moellendorffii SELMODRAFT_68041 I 0.000
Si022565m.g Setaria italica Si022565m.g I 0.000
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.000
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.000
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.000
TCM_029695 Theobroma cacao TCM_029695 I 0.000
TCM_042467 Theobroma cacao TCM_042467 N 0.000
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.000
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.000
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.000
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.000
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.000
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.000