CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc01117
(
Meloidogyne incognita
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
Minc01117
T168715_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y75B8A.6
M00652_2.00
Caenorhabditis elegans
NHKCGGD
HCCGMDN
PBM
Narasimhan et al.(2015)
pTH10798
0.796
0.796
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc01117
CxxC
161
207
SSINRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCVERRC
Minc01117
CxxC
221
266
TFKARIGCNACEDCRGPDCRICLVCLDRRFFNSKYMAGALCAKKRC
Links
Other
CxxC
family TFs
Other
Meloidogyne incognita
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy