CBG09413 (Caenorhabditis briggsae)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00751 (DM) IPR001275 CBG09413 T168902_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG09413
M01924_2.00
Caenorhabditis briggsae
AATGTTTC

GAAACATT
PBM
Weirauch et al.(2014)
pTH8330
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBN06605
M01925_2.00
Caenorhabditis brenneri
NWGTWKN

NMWACWN
PBM
Weirauch et al.(2014)
pTH9247
0.966 0.979
CJA05633_CONSTRUCT
M01936_2.00
PBM CONSTRUCTS
NWGTWDN

NHWACWN
PBM
Weirauch et al.(2014)
pTH9344
0.966 0.957
dmd-10
M00657_2.00
Caenorhabditis elegans
AWTGTTTC

GAAACAWT
PBM
Narasimhan et al.(2015)
pTH9142
0.966 0.979
WUBG_11979
M01922_2.00
Wuchereria bancrofti
ATGTWTCA

TGAWACAT
PBM
Weirauch et al.(2014)
pTH9296
0.952 0.851
Bm2567
M01923_2.00
Brugia malayi
NNNWGTTKHN

NDMAACWNNN
PBM
Weirauch et al.(2014)
pTH9246
0.952 0.851
dmd-3
M00658_2.00
Caenorhabditis elegans
NNWGTWDN

NHWACWNN
PBM
Narasimhan et al.(2015)
pTH10638
0.918 0.745
For this family, TFs with SR scores > 0.845 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01924_2.00 DM 36 82

DNA Binding Domains

Protein ID Domain From To Sequence
CBG09413 DM 36 82

Links

Other DM family TFs
Other Caenorhabditis briggsae TFs

Invalid Input OrderBy

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action