CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG09659
(
Caenorhabditis briggsae
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
CBG09659
T168903_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mab-23
M00654_2.00
Caenorhabditis elegans
NHWWBYDN
NHRVWWDN
PBM
Narasimhan et al.(2015)
pTH9082
0.939
0.978
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG09659
DM
58
103
EQYMCQLCANHGIFNQPKKGHKQKCPYRTCPCSLCALNTKRRHLDQ
Links
Other
DM
family TFs
Other
Caenorhabditis briggsae
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mab-23
Caenorhabditis elegans
WBGene00003114
D
0.939
CRE12856
Caenorhabditis remanei
CRE12856
I
0.939
nAv.1.0.1.g09488
Acanthocheilonema viteae
nAv.1.0.1.g09488
I
0.938
WUBG_07178
Wuchereria bancrofti
WUBG_07178
I
0.936
Bm2506
Brugia malayi
Bm2506
I
0.936
CBN25704
Caenorhabditis brenneri
CBN25704
I
0.936
NECAME_10548
Necator americanus
NECAME_10548
I
0.934
DICVIV_00315
Dictyocaulus viviparus
DICVIV_00315
I
0.934
ACAC_0000050101
Angiostrongylus cantonensis
ACAC_0000050101
I
0.934
TCNE_0000373201
Toxocara canis
TCNE_0000373201
I
0.934
HPBE_0000855101
Heligmosomoides bakeri
HPBE_0000855101
I
0.934
ACOC_0001070801
Angiostrongylus costaricensis
ACOC_0001070801
I
0.934
HPLM_0002064201
Haemonchus placei
HPLM_0002064201
I
0.933
NBR_0001972001
Nippostrongylus brasiliensis
NBR_0001972001
I
0.933
ANCCEY_09967
Ancylostoma ceylanicum
ANCCEY_09967
I
0.933
ALUE_0000029801
Ascaris lumbricoides
ALUE_0000029801
I
0.933
OESDEN_14521
Oesophagostomum dentatum
OESDEN_14521
I
0.933
ASU_11663
Ascaris suum
ASU_11663
I
0.933
OESDEN_21377
Oesophagostomum dentatum
OESDEN_21377
I
0.933
L898_g15145
Steinernema monticolum
L898_g15145
I
0.929
L596_g22821
Steinernema carpocapsae
L596_g22821
I
0.929
L893_g14864
Steinernema glaseri
L893_g14864
I
0.929
L892_g15684
Steinernema scapterisci
L892_g15684
I
0.929
L889_g8599
Steinernema feltiae
L889_g8599
I
0.928
SMUV_0000842901
Syphacia muris
SMUV_0000842901
I
0.922
BXY_1235100
Bursaphelenchus xylophilus
BXY_1235100
I
0.918
SPAL_0001524600
Strongyloides papillosus
SPAL_0001524600
I
0.917
SVE_0006900
Strongyloides venezuelensis
SVE_0006900
I
0.917
SSTP_0000299900
Strongyloides stercoralis
SSTP_0000299900
I
0.916
GPLIN_000975400
Globodera pallida
GPLIN_000975400
I
0.908
PTRK_0001067200
Parastrongyloides trichosuri
PTRK_0001067200
I
0.907
RSKR_0000942000
Rhabditophanes kr3021
RSKR_0000942000
I
0.905
Minc03029
Meloidogyne incognita
Minc03029
I
0.885
maker-nMf.1.1.scaf01464-snap-gene-0.10
Meloidogyne floridensis
maker-nMf.1.1.scaf01464-snap-gene-0.10
I
0.885