dmd-9 (Caenorhabditis elegans)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00751 (DM) IPR001275 WBGene00022060 T169440_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II and sex differentiation. Predicted to be active in nucleus. Is expressed in several structures, including body wall musculature; coelomocyte; intestine; neurons; and somatic nervous system. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dmd-9
M00661_2.00		 Caenorhabditis elegans
ACCTTT
AAAGGT		 PBM
Narasimhan et al.(2015)
pTH8999		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.845 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00661_2.00 DM 27 71

DNA Binding Domains

Protein ID Domain From To Sequence
Y67D8A.3 DM 27 71

Links

Other DM family TFs
Other Caenorhabditis elegans TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE30014 Caenorhabditis remanei CRE30014 I 0.946
CRE30013 Caenorhabditis remanei CRE30013 I 0.946
CBG03381 Caenorhabditis briggsae CBG03381 I 0.942
CJA18545 Caenorhabditis japonica CJA18545 I 0.923
HPBE_0000455001 Heligmosomoides bakeri HPBE_0000455001 I 0.908
HPLM_0000698001 Haemonchus placei HPLM_0000698001 I 0.908
NECAME_02595 Necator americanus NECAME_02595 I 0.908
CGOC_0001138001 Cylicostephanus goldi CGOC_0001138001 I 0.908
NBR_0000615901 Nippostrongylus brasiliensis NBR_0000615901 I 0.908
HCOI00493000 Haemonchus contortus HCOI00493000 I 0.908
ANCCAN_12400 Ancylostoma caninum ANCCAN_12400 I 0.908
SVUK_0000682301 Strongylus vulgaris SVUK_0000682301 I 0.906
Hba_03543 Heterorhabditis bacteriophora Hba_03543 I 0.906
ACAC_0000297301 Angiostrongylus cantonensis ACAC_0000297301 I 0.887
PPA11400 Pristionchus pacificus PPA11400 I 0.870
scaffold54-EXSNAP2012.9 Pristionchus exspectatus scaffold54-EXSNAP2012.9 I 0.870
ASU_04764 Ascaris suum ASU_04764 I 0.867
BXY_0004500 Bursaphelenchus xylophilus BXY_0004500 I 0.867
ASIM_0001248901 Anisakis simplex ASIM_0001248901 I 0.867
SMUV_0001084001 Syphacia muris SMUV_0001084001 I 0.859
L889_g19153 Steinernema feltiae L889_g19153 I 0.859
L892_g27590 Steinernema scapterisci L892_g27590 I 0.857
L596_g25360 Steinernema carpocapsae L596_g25360 I 0.857
ACOC_0000878601 Angiostrongylus costaricensis ACOC_0000878601 I 0.855
NECAME_08769 Necator americanus NECAME_08769 I 0.855
ANCCEY_11797 Ancylostoma ceylanicum ANCCEY_11797 I 0.855
NBR_0000982201 Nippostrongylus brasiliensis NBR_0000982201 I 0.855
HCOI00602900 Haemonchus contortus HCOI00602900 I 0.855
HCOI01956800 Haemonchus contortus HCOI01956800 I 0.855
EVEC_0001300201 Enterobius vermicularis EVEC_0001300201 I 0.854
OESDEN_12332 Oesophagostomum dentatum OESDEN_12332 I 0.853
Hba_20459 Heterorhabditis bacteriophora Hba_20459 I 0.852
L898_g6334 Steinernema monticolum L898_g6334 I 0.849
L893_g6833 Steinernema glaseri L893_g6833 I 0.849