|
ENSP00000305785-D1
(Bos grunniens)
DM
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00751 (DM) |
IPR001275 |
ENSP00000305785-D1 |
T169470_2.00 |
GigaDB (2015-Oct-22) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
DMRT2
M01931_2.00 |
Homo sapiens |
NAATKTATHN |
NDATAMATTN |
PBM
Weirauch et al.(2014)
pTH9189
|
0.969
|
1.000
|
DMRT2
M10434_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$DMRT2_01
|
0.969
|
1.000
|
dmrt99B
M01935_2.00 |
Drosophila melanogaster |
WRTWDCNDNN |
NNHNGHWAYW |
PBM
Weirauch et al.(2014)
pTH9261
|
0.934
|
0.851
|
dmrt99B
M01211_2.00 |
Drosophila melanogaster |
NNHDTDDNNN |
NNNHHAHDNN |
PBM
Lambert et al.(2019)
pTH9799
|
0.934
|
0.851
|
dmrt99B
M03720_2.00 |
Drosophila melanogaster |
HNGHWACAATGTWDCND |
HNGHWACATTGTWDCND |
SELEX
Nitta et al.(2015)
dmrt99B_1
|
0.934
|
0.851
|
DMRTA2
M01930_2.00 |
Homo sapiens |
NNHDTDDNNN |
NNNHHAHDNN |
PBM
Weirauch et al.(2014)
pTH9198
|
0.934
|
0.830
|
dmrta2
M01937_2.00 |
Xenopus tropicalis |
NNWDWDDN |
NHHWHWNN |
PBM
Weirauch et al.(2014)
pTH9300
|
0.934
|
0.830
|
DMRTA2
M04692_2.00 |
Homo sapiens |
VHTGTWDCVDHN |
NDHBGHWACADB |
SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX
|
0.934
|
0.830
|
DMRTA2
M10433_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$DMRT5_01
|
0.934
|
0.830
|
DMRTA2
M04693_2.00 |
Homo sapiens |
HHTGTWDCVNHN |
NDNBGHWACADD |
SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX
|
0.934
|
0.830
|
DMRT3
M01927_2.00 |
Homo sapiens |
NWTGTAWCMNN |
NNKGWTACAWN |
PBM
Weirauch et al.(2014)
pTH9188
|
0.923
|
0.766
|
DMRT3
M04681_2.00 |
Homo sapiens |
AWTGTAWCAAWWH |
DWWTTGWTACAWT |
SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX
|
0.923
|
0.766
|
DMRT3
M10430_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$DMRT3_01
|
0.923
|
0.766
|
DMRT3
M04682_2.00 |
Homo sapiens |
AATGTAWCRAWWY |
RWWTYGWTACATT |
SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX
|
0.923
|
0.766
|
dmd-5
M00659_2.00 |
Caenorhabditis elegans |
WNWRTWDHNN |
NNDHWAYWNW |
PBM
Narasimhan et al.(2015)
pTH10777
|
0.916
|
0.766
|
Dmrt1
M09027_2.00 |
Mus musculus |
HDGHWACAAWGTWDCHN |
NDGHWACWTTGTWDCHD |
Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C
|
0.911
|
0.787
|
DMRT1
M01928_2.00 |
Homo sapiens |
NDWGTWDCNN |
NNGHWACWHN |
PBM
Weirauch et al.(2014)
pTH9197
|
0.910
|
0.787
|
DMRT1
M01929_2.00 |
Homo sapiens |
TGTATCAA |
TTGATACA |
PBM
Weirauch et al.(2014)
pTH9446
|
0.910
|
0.787
|
DMRT1
M04683_2.00 |
Homo sapiens |
NWTGTWDCVWHN |
NDWBGHWACAWN |
SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX
|
0.910
|
0.787
|
DMRT1
M10431_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$DMRT1_01
|
0.910
|
0.787
|
DMRT1
M04684_2.00 |
Homo sapiens |
NDYGTWDCVNNN |
NNNBGHWACRHN |
SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX
|
0.910
|
0.787
|
dmd-4
M00656_2.00 |
Caenorhabditis elegans |
NWGTAWCNNN |
NNNGWTACWN |
PBM
Narasimhan et al.(2015)
pTH10640
|
0.895
|
0.702
|
dmrt93B
M03718_2.00 |
Drosophila melanogaster |
NDTGTATCRWW |
WWYGATACAHN |
SELEX
Nitta et al.(2015)
dmrt93B_1
|
0.882
|
0.638
|
dmrt93B
M03719_2.00 |
Drosophila melanogaster |
NNHGTAWCNNN |
NNNGWTACDNN |
SELEX
Nitta et al.(2015)
dmrt93B_2
|
0.882
|
0.638
|
Dmrtc2
M00789_2.00 |
Mus musculus |
NNNATGTATHMNN |
NNKDATACATNNN |
PBM
Weirauch et al.(2013)
pTH3205
|
0.861
|
0.638
|
DMRTC2
M04685_2.00 |
Homo sapiens |
TGTAWCRTTB |
VAAYGWTACA |
SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_1
|
0.861
|
0.638
|
DMRTC2
M04686_2.00 |
Homo sapiens |
NWTGTADCAAWW |
WWTTGHTACAWN |
SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_2
|
0.861
|
0.638
|
DMRTC2
M04688_2.00 |
Homo sapiens |
TGTATCGTTC |
GAACGATACA |
SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_1
|
0.861
|
0.638
|
DMRTC2
M04689_2.00 |
Homo sapiens |
NDTGTRKCAAWH |
DWTTGMYACAHN |
SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_2
|
0.861
|
0.638
|
DMRTC2
M10432_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$DMRT7_01
|
0.861
|
0.638
|
DMRTC2
M04687_2.00 |
Homo sapiens |
NATGTAKCRAWW |
WWTYGMTACATN |
SELEX
Yin et al.(2017)
DMRTC2_eDBD_Methyl-HT-SELEX
|
0.861
|
0.638
|
DMRTC2
M04690_2.00 |
Homo sapiens |
YGTATCGTTY |
RAACGATACR |
SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_1
|
0.861
|
0.638
|
DMRTC2
M04691_2.00 |
Homo sapiens |
NRTGTRKCRAWW |
WWTYGMYACAYN |
SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_2
|
0.861
|
0.638
|
DMRTC2
M01926_2.00 |
Cavia porcellus |
NNHDWNDN |
NHNWHDNN |
PBM
Weirauch et al.(2014)
pTH9250
|
0.860
|
0.617
|
ENSMODG00000010059
M01932_2.00 |
Monodelphis domestica |
NDWGTWDHNN |
NNDHWACWHN |
PBM
Weirauch et al.(2014)
pTH9215
|
0.860
|
0.596
|
Dmrtb1
M09028_2.00 |
Mus musculus |
DGHWACAMWGTWDCHV |
BDGHWACWKTGTWDCH |
Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C
|
0.846
|
0.574
|
For this family, TFs with SR scores > 0.845 will likely have a similar motif |