CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hba_20459
(
Heterorhabditis bacteriophora
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
Hba_20459
T169813_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-9
M00661_2.00
Caenorhabditis elegans
ACCTTT
AAAGGT
PBM
Narasimhan et al.(2015)
pTH8999
0.852
0.644
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hba_20459
DM
62
106
RTLFCRKCEGHGLQVVLKGHASRCPYNNCQCKTCTNVMSMRANAI
Links
Other
DM
family TFs
Other
Heterorhabditis bacteriophora
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_11797
Ancylostoma ceylanicum
ANCCEY_11797
I
0.952
HCOI01956800
Haemonchus contortus
HCOI01956800
I
0.952
NBR_0000982201
Nippostrongylus brasiliensis
NBR_0000982201
I
0.952
NECAME_08769
Necator americanus
NECAME_08769
I
0.952
ACOC_0000878601
Angiostrongylus costaricensis
ACOC_0000878601
I
0.952
HCOI00602900
Haemonchus contortus
HCOI00602900
I
0.952
dmd-7
Caenorhabditis elegans
WBGene00019521
N
0.949
CJA06642
Caenorhabditis japonica
CJA06642
N
0.949
CRE30862
Caenorhabditis remanei
CRE30862
N
0.949
CBG18895
Caenorhabditis briggsae
CBG18895
N
0.949
OESDEN_12332
Oesophagostomum dentatum
OESDEN_12332
I
0.948
L889_g19153
Steinernema feltiae
L889_g19153
I
0.945
SMUV_0001084001
Syphacia muris
SMUV_0001084001
I
0.942
ASIM_0001248901
Anisakis simplex
ASIM_0001248901
I
0.941
L892_g27590
Steinernema scapterisci
L892_g27590
I
0.940
PPA11400
Pristionchus pacificus
PPA11400
I
0.940
scaffold54-EXSNAP2012.9
Pristionchus exspectatus
scaffold54-EXSNAP2012.9
I
0.940
L596_g25360
Steinernema carpocapsae
L596_g25360
I
0.940
L893_g6833
Steinernema glaseri
L893_g6833
I
0.936
L898_g6334
Steinernema monticolum
L898_g6334
I
0.936
EVEC_0001300201
Enterobius vermicularis
EVEC_0001300201
I
0.936
BXY_0004500
Bursaphelenchus xylophilus
BXY_0004500
I
0.935
RSKR_0000795800
Rhabditophanes kr3021
RSKR_0000795800
N
0.935
ASU_04764
Ascaris suum
ASU_04764
I
0.935
snap_masked-nMf.1.1.scaf16852-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf16852-processed-gene-0.2
N
0.928
GPLIN_000574100
Globodera pallida
GPLIN_000574100
N
0.924
WUBG_01942
Wuchereria bancrofti
WUBG_01942
N
0.915
OFLC_0001397801
Onchocerca flexuosa
OFLC_0001397801
N
0.915
WBGene00240965
Onchocerca volvulus
WBGene00240965
N
0.915
MhA1_Contig1400.frz3.gene1
Meloidogyne hapla
MhA1_Contig1400.frz3.gene1
N
0.910
PTRK_0001628400
Parastrongyloides trichosuri
PTRK_0001628400
N
0.910
SPAL_0001661800
Strongyloides papillosus
SPAL_0001661800
N
0.900
SVE_0126800
Strongyloides venezuelensis
SVE_0126800
N
0.900
SSTP_0000497600
Strongyloides stercoralis
SSTP_0000497600
N
0.900
nDi.2.2.2.g06479
Dirofilaria immitis
nDi.2.2.2.g06479
N
0.900
CBG03381
Caenorhabditis briggsae
CBG03381
I
0.863
CRE30014
Caenorhabditis remanei
CRE30014
I
0.860
CRE30013
Caenorhabditis remanei
CRE30013
I
0.860
CJA18545
Caenorhabditis japonica
CJA18545
I
0.858
dmd-9
Caenorhabditis elegans
WBGene00022060
D
0.852