CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI01956800
(
Haemonchus contortus
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
HCOI01956800
T169818_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-9
M00661_2.00
Caenorhabditis elegans
ACCTTT
AAAGGT
PBM
Narasimhan et al.(2015)
pTH8999
0.855
0.630
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI01956800.t1
DM
14
59
RTLFCRKCEGHGLQVVLKGHASRCPYNNCQCKTCSNVMSMRANAII
Links
Other
DM
family TFs
Other
Haemonchus contortus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0000982201
Nippostrongylus brasiliensis
NBR_0000982201
I
0.963
ACOC_0000878601
Angiostrongylus costaricensis
ACOC_0000878601
I
0.963
ANCCEY_11797
Ancylostoma ceylanicum
ANCCEY_11797
I
0.955
NECAME_08769
Necator americanus
NECAME_08769
I
0.955
HCOI00602900
Haemonchus contortus
HCOI00602900
I
0.955
EVEC_0001300201
Enterobius vermicularis
EVEC_0001300201
I
0.952
OESDEN_12332
Oesophagostomum dentatum
OESDEN_12332
I
0.952
Hba_20459
Heterorhabditis bacteriophora
Hba_20459
I
0.952
L889_g19153
Steinernema feltiae
L889_g19153
I
0.948
SMUV_0001084001
Syphacia muris
SMUV_0001084001
I
0.946
CJA06642
Caenorhabditis japonica
CJA06642
N
0.944
dmd-7
Caenorhabditis elegans
WBGene00019521
N
0.944
CRE30862
Caenorhabditis remanei
CRE30862
N
0.944
CBG18895
Caenorhabditis briggsae
CBG18895
N
0.944
L596_g25360
Steinernema carpocapsae
L596_g25360
I
0.943
L892_g27590
Steinernema scapterisci
L892_g27590
I
0.943
ASIM_0001248901
Anisakis simplex
ASIM_0001248901
I
0.942
PPA11400
Pristionchus pacificus
PPA11400
I
0.941
scaffold54-EXSNAP2012.9
Pristionchus exspectatus
scaffold54-EXSNAP2012.9
I
0.941
L898_g6334
Steinernema monticolum
L898_g6334
I
0.940
L893_g6833
Steinernema glaseri
L893_g6833
I
0.940
BXY_0004500
Bursaphelenchus xylophilus
BXY_0004500
I
0.936
ASU_04764
Ascaris suum
ASU_04764
I
0.936
RSKR_0000795800
Rhabditophanes kr3021
RSKR_0000795800
N
0.936
snap_masked-nMf.1.1.scaf16852-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf16852-processed-gene-0.2
N
0.929
GPLIN_000574100
Globodera pallida
GPLIN_000574100
N
0.926
OFLC_0001397801
Onchocerca flexuosa
OFLC_0001397801
N
0.916
WBGene00240965
Onchocerca volvulus
WBGene00240965
N
0.916
MhA1_Contig1400.frz3.gene1
Meloidogyne hapla
MhA1_Contig1400.frz3.gene1
N
0.912
WUBG_01942
Wuchereria bancrofti
WUBG_01942
N
0.911
SSTP_0000497600
Strongyloides stercoralis
SSTP_0000497600
N
0.902
SVE_0126800
Strongyloides venezuelensis
SVE_0126800
N
0.902
SPAL_0001661800
Strongyloides papillosus
SPAL_0001661800
N
0.902
nDi.2.2.2.g06479
Dirofilaria immitis
nDi.2.2.2.g06479
N
0.902
PTRK_0001628400
Parastrongyloides trichosuri
PTRK_0001628400
N
0.902
CBG03381
Caenorhabditis briggsae
CBG03381
I
0.871
CRE30013
Caenorhabditis remanei
CRE30013
I
0.863
CRE30014
Caenorhabditis remanei
CRE30014
I
0.863
CJA18545
Caenorhabditis japonica
CJA18545
I
0.860
dmd-9
Caenorhabditis elegans
WBGene00022060
D
0.855
scaffold126-EXSNAP2012.44
Pristionchus exspectatus
scaffold126-EXSNAP2012.44
N
0.846
scaffold251-EXSNAP2012.33
Pristionchus exspectatus
scaffold251-EXSNAP2012.33
N
0.846