CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g31098
(
Steinernema glaseri
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
L893_g31098
T169881_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-10
M00657_2.00
Caenorhabditis elegans
AWTGTTTC
GAAACAWT
PBM
Narasimhan et al.(2015)
pTH9142
0.965
0.915
CBG09413
M01924_2.00
Caenorhabditis briggsae
AATGTTTC
GAAACATT
PBM
Weirauch et al.(2014)
pTH8330
0.963
0.894
WUBG_11979
M01922_2.00
Wuchereria bancrofti
ATGTWTCA
TGAWACAT
PBM
Weirauch et al.(2014)
pTH9296
0.961
0.915
Bm2567
M01923_2.00
Brugia malayi
NNNWGTTKHN
NDMAACWNNN
PBM
Weirauch et al.(2014)
pTH9246
0.961
0.915
CBN06605
M01925_2.00
Caenorhabditis brenneri
NWGTWKN
NMWACWN
PBM
Weirauch et al.(2014)
pTH9247
0.959
0.872
CJA05633_CONSTRUCT
M01936_2.00
PBM CONSTRUCTS
NWGTWDN
NHWACWN
PBM
Weirauch et al.(2014)
pTH9344
0.959
0.872
dmd-3
M00658_2.00
Caenorhabditis elegans
NNWGTWDN
NHWACWNN
PBM
Narasimhan et al.(2015)
pTH10638
0.923
0.766
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g31098.t1
DM
221
267
RVPNCQKCGQHGRKSRLKGHKRSCPFRDCNCPKCQVVSERQKLMADQ
Links
Other
DM
family TFs
Other
Steinernema glaseri
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy