CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g08649
(
Acanthocheilonema viteae
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
nAv.1.0.1.g08649
T169910_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-8
M00660_2.00
Caenorhabditis elegans
TGTTGMAAWN
NWTTKCAACA
PBM
Narasimhan et al.(2015)
pTH10837
0.863
0.652
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t08649-RA
DM
22
65
KRHCGMCRQHGMLVETRGHHCKRKNCNCLRCLLIRQRRKIMSTQ
nAv.1.0.1.t08649-RA
DM
116
160
QCYICQKCKNHGVLVWKKEHKRHCLYANCKCDQCELIEKRRKLDQ
Links
Other
DM
family TFs
Other
Acanthocheilonema viteae
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm5937
Brugia malayi
Bm5937
I
0.953
BTMF_0000940801
Brugia timori
BTMF_0000940801
I
0.953
LOAG_04009
Loa loa
LOAG_04009
I
0.945
TCLT_0000991301
Thelazia callipaeda
TCLT_0000991301
N
0.940
WBGene00243680
Onchocerca volvulus
WBGene00243680
N
0.937
L889_g31510
Steinernema feltiae
L889_g31510
I
0.890
L893_g13923
Steinernema glaseri
L893_g13923
I
0.890
L892_g20637
Steinernema scapterisci
L892_g20637
I
0.890
L596_g1691
Steinernema carpocapsae
L596_g1691
I
0.890
DICVIV_01396
Dictyocaulus viviparus
DICVIV_01396
I
0.879
Hba_11006
Heterorhabditis bacteriophora
Hba_11006
I
0.876
EVEC_0001219101
Enterobius vermicularis
EVEC_0001219101
I
0.875
NECAME_09584
Necator americanus
NECAME_09584
I
0.875
ANCCEY_09710
Ancylostoma ceylanicum
ANCCEY_09710
I
0.875
SVUK_0000327101
Strongylus vulgaris
SVUK_0000327101
I
0.875
SPAL_0000741800
Strongyloides papillosus
SPAL_0000741800
I
0.872
HPLM_0000403401
Haemonchus placei
HPLM_0000403401
I
0.872
SVE_1023400
Strongyloides venezuelensis
SVE_1023400
I
0.872
SSTP_0001193100
Strongyloides stercoralis
SSTP_0001193100
I
0.872
ANCCAN_04748
Ancylostoma caninum
ANCCAN_04748
I
0.871
HPBE_0001572101
Heligmosomoides bakeri
HPBE_0001572101
I
0.870
PTRK_0000045900
Parastrongyloides trichosuri
PTRK_0000045900
I
0.866
CRE08815
Caenorhabditis remanei
CRE08815
I
0.866
dmd-8
Caenorhabditis elegans
WBGene00020708
D
0.863
CBG01382
Caenorhabditis briggsae
CBG01382
I
0.861
nDi.2.2.2.g03017
Dirofilaria immitis
nDi.2.2.2.g03017
N
0.861
CJA09451
Caenorhabditis japonica
CJA09451
I
0.859
CBN09492
Caenorhabditis brenneri
CBN09492
I
0.858
CBN29810
Caenorhabditis brenneri
CBN29810
I
0.858
scaffold1063-EXSNAP2012.7
Pristionchus exspectatus
scaffold1063-EXSNAP2012.7
I
0.857
PPA14239
Pristionchus pacificus
PPA14239
I
0.857
RSKR_0000332900
Rhabditophanes kr3021
RSKR_0000332900
N
0.851