snap_masked-nMf.1.1.scaf16852-processed-gene-0.2 (Meloidogyne floridensis)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 snap_masked-nMf.1.1.scaf16852-processed-gene-0.2 T170030_2.00 WormBase:ParaSite (2015-Oct-22)
NCBI Gene Info:
This gene encodes a member of the Smad family of signal transduction proteins. Smad proteins are phosphorylated and activated by transmembrane serine-threonine receptor kinases in response to transforming growth factor (TGF)-beta signaling. The product of this gene forms homomeric complexes and heteromeric complexes with other activated Smad proteins, which then accumulate in the nucleus and regulate the transcription of target genes. This protein binds to DNA and recognizes an 8-bp palindromic sequence (GTCTAGAC) called the Smad-binding element (SBE). The protein acts as a tumor suppressor and inhibits epithelial cell proliferation. It may also have an inhibitory effect on tumors by reducing angiogenesis and increasing blood vessel hyperpermeability. The encoded protein is a crucial component of the bone morphogenetic protein signaling pathway. The Smad proteins are subject to complex regulation by post-translational modifications. Mutations or deletions in this gene have been shown to result in pancreatic cancer, juvenile polyposis syndrome, and hereditary hemorrhagic telangiectasia syndrome. [provided by RefSeq, May 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
snap_masked-nMf.1.1.scaf16852-processed-gene-0.2-mRNA-1 DM 43 87

Links

Other DM family TFs
Other Meloidogyne floridensis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GPLIN_000574100 Globodera pallida GPLIN_000574100 N 0.946
MhA1_Contig1400.frz3.gene1 Meloidogyne hapla MhA1_Contig1400.frz3.gene1 N 0.942
ASU_04764 Ascaris suum ASU_04764 I 0.934
BXY_0004500 Bursaphelenchus xylophilus BXY_0004500 I 0.934
L889_g19153 Steinernema feltiae L889_g19153 I 0.932
HCOI01956800 Haemonchus contortus HCOI01956800 I 0.929
ANCCEY_11797 Ancylostoma ceylanicum ANCCEY_11797 I 0.929
ACOC_0000878601 Angiostrongylus costaricensis ACOC_0000878601 I 0.929
HCOI00602900 Haemonchus contortus HCOI00602900 I 0.929
NBR_0000982201 Nippostrongylus brasiliensis NBR_0000982201 I 0.929
NECAME_08769 Necator americanus NECAME_08769 I 0.929
Hba_20459 Heterorhabditis bacteriophora Hba_20459 I 0.928
SMUV_0001084001 Syphacia muris SMUV_0001084001 I 0.926
OESDEN_12332 Oesophagostomum dentatum OESDEN_12332 I 0.925
L892_g27590 Steinernema scapterisci L892_g27590 I 0.925
L596_g25360 Steinernema carpocapsae L596_g25360 I 0.925
ASIM_0001248901 Anisakis simplex ASIM_0001248901 I 0.924
PPA11400 Pristionchus pacificus PPA11400 I 0.922
scaffold54-EXSNAP2012.9 Pristionchus exspectatus scaffold54-EXSNAP2012.9 I 0.922
L893_g6833 Steinernema glaseri L893_g6833 I 0.920
L898_g6334 Steinernema monticolum L898_g6334 I 0.920
EVEC_0001300201 Enterobius vermicularis EVEC_0001300201 I 0.918
CBG18895 Caenorhabditis briggsae CBG18895 N 0.917
CJA06642 Caenorhabditis japonica CJA06642 N 0.917
CRE30862 Caenorhabditis remanei CRE30862 N 0.917
dmd-7 Caenorhabditis elegans WBGene00019521 N 0.917
RSKR_0000795800 Rhabditophanes kr3021 RSKR_0000795800 N 0.905
OFLC_0001397801 Onchocerca flexuosa OFLC_0001397801 N 0.898
WBGene00240965 Onchocerca volvulus WBGene00240965 N 0.898
WUBG_01942 Wuchereria bancrofti WUBG_01942 N 0.896
SVE_0126800 Strongyloides venezuelensis SVE_0126800 N 0.892
SSTP_0000497600 Strongyloides stercoralis SSTP_0000497600 N 0.892
SPAL_0001661800 Strongyloides papillosus SPAL_0001661800 N 0.892
PTRK_0001628400 Parastrongyloides trichosuri PTRK_0001628400 N 0.892
nDi.2.2.2.g06479 Dirofilaria immitis nDi.2.2.2.g06479 N 0.890