TRE_0001691701 (Trichobilharzia regenti)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 TRE_0001691701 T170108_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DMRT2
M01931_2.00
Homo sapiens
NAATKTATHN

NDATAMATTN
PBM
Weirauch et al.(2014)
pTH9189
0.917 0.787
DMRT2
M10434_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT2_01
0.917 0.787
DMRTA2
M01930_2.00
Homo sapiens
NNHDTDDNNN

NNNHHAHDNN
PBM
Weirauch et al.(2014)
pTH9198
0.913 0.745
dmrta2
M01937_2.00
Xenopus tropicalis
NNWDWDDN

NHHWHWNN
PBM
Weirauch et al.(2014)
pTH9300
0.913 0.745
DMRTA2
M04692_2.00
Homo sapiens
VHTGTWDCVDHN

NDHBGHWACADB
SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX
0.913 0.745
DMRTA2
M10433_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT5_01
0.913 0.745
DMRTA2
M04693_2.00
Homo sapiens
HHTGTWDCVNHN

NDNBGHWACADD
SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX
0.913 0.745
dmrt99B
M01935_2.00
Drosophila melanogaster
WRTWDCNDNN

NNHNGHWAYW
PBM
Weirauch et al.(2014)
pTH9261
0.913 0.723
dmrt99B
M01211_2.00
Drosophila melanogaster
NNHDTDDNNN

NNNHHAHDNN
PBM
Lambert et al.(2019)
pTH9799
0.913 0.723
dmrt99B
M03720_2.00
Drosophila melanogaster
HNGHWACAATGTWDCND

HNGHWACATTGTWDCND
SELEX
Nitta et al.(2015)
dmrt99B_1
0.913 0.723
DMRT3
M01927_2.00
Homo sapiens
NWTGTAWCMNN

NNKGWTACAWN
PBM
Weirauch et al.(2014)
pTH9188
0.899 0.702
DMRT3
M04681_2.00
Homo sapiens
AWTGTAWCAAWWH

DWWTTGWTACAWT
SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX
0.899 0.702
DMRT3
M10430_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT3_01
0.899 0.702
DMRT3
M04682_2.00
Homo sapiens
AATGTAWCRAWWY

RWWTYGWTACATT
SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX
0.899 0.702
dmd-4
M00656_2.00
Caenorhabditis elegans
NWGTAWCNNN

NNNGWTACWN
PBM
Narasimhan et al.(2015)
pTH10640
0.894 0.681
dmd-5
M00659_2.00
Caenorhabditis elegans
WNWRTWDHNN

NNDHWAYWNW
PBM
Narasimhan et al.(2015)
pTH10777
0.891 0.702
Dmrt1
M09027_2.00
Mus musculus
HDGHWACAAWGTWDCHN

NDGHWACWTTGTWDCHD
Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C
0.865 0.660
DMRT1
M01928_2.00
Homo sapiens
NDWGTWDCNN

NNGHWACWHN
PBM
Weirauch et al.(2014)
pTH9197
0.862 0.660
DMRT1
M01929_2.00
Homo sapiens
TGTATCAA

TTGATACA
PBM
Weirauch et al.(2014)
pTH9446
0.862 0.660
DMRT1
M04683_2.00
Homo sapiens
NWTGTWDCVWHN

NDWBGHWACAWN
SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX
0.862 0.660
DMRT1
M10431_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT1_01
0.862 0.660
DMRT1
M04684_2.00
Homo sapiens
NDYGTWDCVNNN

NNNBGHWACRHN
SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX
0.862 0.660
Dmrtb1
M09028_2.00
Mus musculus
DGHWACAMWGTWDCHV

BDGHWACWKTGTWDCH
Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C
0.861 0.596
dmrt93B
M03718_2.00
Drosophila melanogaster
NDTGTATCRWW

WWYGATACAHN
SELEX
Nitta et al.(2015)
dmrt93B_1
0.855 0.723
dmrt93B
M03719_2.00
Drosophila melanogaster
NNHGTAWCNNN

NNNGWTACDNN
SELEX
Nitta et al.(2015)
dmrt93B_2
0.855 0.723
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0001691701-mRNA-1 DM 62 108

Links

Other DM family TFs
Other Trichobilharzia regenti TFs

Invalid Input OrderBy

532 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action